FFCP PHASE1:Hg19::chr11:14358620..14358659,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:14358620..14358659,- to FFCP PHASE1:Hg19::chr11:14358620..14358659,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22800 | |EntrezGene=22800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17271 | |HGNC=17271 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ87 | |UniProt=E9PQ87 | ||
|association_with_transcript=52bp_to_ENST00000531421_5end | |||
|cluster_id=chr11:14358620..14358659,- | |||
|description=CAGE_peak_4_at_RRAS2_5end | |||
|id=chr11:14358620..14358659,- | |||
|ontology_enrichment_celltype=CL:0000066!2.55e-15!254;CL:0000548!6.44e-12!679;CL:0000004!6.44e-12!679;CL:0000255!6.44e-12!679;CL:0000012!1.48e-11!682;CL:0000003!9.17e-09!722;CL:0000220!1.44e-08!246;CL:0002321!2.70e-08!248;CL:0000063!2.70e-08!578;CL:0002076!1.83e-07!43;CL:0000076!3.76e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.09e-13;13!CL:0002076;3.44e-11;42!CL:0002621;5.68e-11;3!CL:0002166;7.48e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-13,253;CL:0002368,5.58e-13,13;CL:0002076,1.14e-12,42;CL:0000223,5.62e-11,58;CL:0002621,5.64e-11,3;CL:0002166,7.30e-11,3;CL:0000076,1.07e-08,63;CL:0002321,3.42e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000223;8.67e-07;58 | |||
|ontology_enrichment_disease=DOID:305!5.83e-08!106;DOID:7!2.01e-07!39;DOID:1749!3.28e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.58e-07;14!DOID:3910;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.51e-07,14;DOID:3910,5.93e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.68e-11;3!UBERON:0004807;8.78e-10;22!UBERON:0003729;1.51e-08;13!UBERON:0001708;3.19e-08;4!UBERON:0008895;3.19e-08;4!UBERON:0004903;4.55e-07;2!UBERON:0002173;4.55e-07;2!UBERON:0002186;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.64e-11,3;UBERON:0004807,5.19e-09,28;UBERON:0003729,1.50e-08,13;UBERON:0001708,3.13e-08,4;UBERON:0008895,3.13e-08,4;UBERON:0001004,1.07e-07,74;UBERON:0004903,5.93e-07,2;UBERON:0002173,5.93e-07,2;UBERON:0002186,5.93e-07,2;UBERON:0000153,8.66e-07,62;UBERON:0007811,8.66e-07,62;UBERON:0000033,9.93e-07,56 | |||
|phase1_expression=0,0,0.986680828671798,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0,0,0,1.10926203050036,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.619412741790207,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0,1.61131726843659,1.52054421143703,0,0,0,0,0.44905874525234,0.225222960966644,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0.404132016209064,0.163461903113459,0,0,0.70296429550139,0,0,0,0,0.485618833104395,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0.309157587715317,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,0.323292113637624,0,0,0,11.5956511897978,7.36414525595254,5.44928731239107,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0.71181185733329,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0.122988438543114,1.3725424823882,0.878002283269004,1.1240175325762,0.100528972411631,1.38882667737794,0,0,1.44331342025273,0.115930404975077,0.70445216541493,0.433099343283221,0,1.33177906564219,0,0,0,0,0,10.3107217385455,5.87937448696008,5.38745369521069,0.626909658919938,0.581267877027924,1.15014803749563,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0.448524337381443,0,0.22001485746285,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,2.39624855491583,0,0,0.723906533337896,0.205476322550383,1.07436577943937,1.12085143993527,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,1.02511319404561,1.02341449813341,0.321707842287215,0,0,0,0,0,0,0,0.601519410909855,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.770153371044148,0.784349769176855,0,0.844413031143006,0,0,1.29549549661284,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0.413509717453592,0.107420244868274,0,0.340906509664404,0.0890320356467374,1.65284915360978,1.15314040419064,1.02090169995667,1.51736671283325,0,0,0,0.616067160352178,0,0,0,0.429374660225974,0,0.632758849437452,0.38126038784765,0,0,0,0.78494864019923,0.539617372749944,0,0.471249609382746,0,0,0,0,6.09283724078211,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,1.05844323998063,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.13654458722565,0.47748896947538,0.296964680832639,0,0,0,2.22617410045812,0,0.422250816255987,0,0,0,11.249555075237,0,0.311039587661807,0.449341755736634,0.895105873378046,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0.227586896570999,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,0,0,0,1.55715908783166,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0.611030144933625,0.889563386041866,0.494255755786011,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0,3.91969589657511,0.0870592065804026,0,19.2624356368211,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0.240476460754601,0,0.799238438328521,0.144090417154106,0,0,0.576219191952599,0,0,0.135904206073614,0,1.52997326454483,0.288950589901519,0,0,0,1.71906176567983,0,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.688992370603241,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,1.5840050477911,0,0.767660789277781,0,0,0.25426853765475,0,0,0,2.39460383124975,0.246277562248017,0,0.453248366080503,0,0,0,0.39669780522807,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.74988244777264,0,0,2.11739237728355,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.757612021100357,1.50940741051545,0,6.86520205190771,0.453692771289717,0.621748802331122,0.147855149989634,0.796483835818512,4.49803112163605,0.310525913752519,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0.813741466409323,0,6.5520439795918,0,1.59238355479446,9.20063858725253,0,0,0,1.34833881285112,0.428883182749851,0.5219885839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| ||
|short_description=p4@RRAS2 | |||
}} | }} |
Latest revision as of 21:28, 16 September 2015
Short description: | p4@RRAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RRAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000531421_5end |
EntrezGene: | RRAS2 |
HGNC: | 17271 |
UniProt: | E9PQ87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.72e-13 | 253 |
respiratory epithelial cell | 5.58e-13 | 13 |
endo-epithelial cell | 1.14e-12 | 42 |
endodermal cell | 5.62e-11 | 58 |
gingival epithelial cell | 5.64e-11 | 3 |
epithelial cell of Malassez | 7.30e-11 | 3 |
squamous epithelial cell | 1.07e-08 | 63 |
embryonic cell | 3.42e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.64e-11 | 3 |
respiratory system epithelium | 5.19e-09 | 28 |
mouth mucosa | 1.50e-08 | 13 |
jaw skeleton | 3.13e-08 | 4 |
splanchnocranium | 3.13e-08 | 4 |
respiratory system | 1.07e-07 | 74 |
bronchoalveolar duct junction | 5.93e-07 | 2 |
alveolar duct | 5.93e-07 | 2 |
bronchiole | 5.93e-07 | 2 |
anterior region of body | 8.66e-07 | 62 |
craniocervical region | 8.66e-07 | 62 |
head | 9.93e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.51e-07 | 14 |
lung adenocarcinoma | 5.93e-07 | 2 |