FFCP PHASE1:Hg19::chr16:50775971..50776014,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:50775971..50776014,+
|short_description=p1@CYLD
|description=CAGE_peak_1_at_CYLD_5end
|association_with_transcript=10bp_to_ENST00000311559,ENST00000427738...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1540 | |EntrezGene=1540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2584 | |HGNC=2584 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQC7,F5H2R7 | |UniProt=Q9NQC7,F5H2R7 | ||
|association_with_transcript=10bp_to_ENST00000311559,ENST00000427738,ENST00000540145,NM_001042355,NM_015247,uc002egn.1,uc002ego.2,uc002egp.1,uc002egq.1,uc010cbs.1_5end | |||
|cluster_id=chr16:50775971..50776014,+ | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_CYLD_5end | |||
|id=chr16:50775971..50776014,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.30e-38!140;CL:0002031!5.33e-31!124;CL:0000766!3.93e-30!76;CL:0002087!6.51e-28!119;CL:0000037!1.28e-27!172;CL:0000566!1.28e-27!172;CL:0000557!1.98e-26!71;CL:0002057!4.82e-26!42;CL:0002032!1.62e-25!165;CL:0000837!1.62e-25!165;CL:0000839!4.42e-25!70;CL:0000988!6.68e-25!182;CL:0002009!2.61e-23!65;CL:0000860!1.07e-22!45;CL:0002194!2.68e-22!63;CL:0000576!2.68e-22!63;CL:0000040!2.68e-22!63;CL:0000559!2.68e-22!63;CL:0000763!3.43e-19!112;CL:0000049!3.43e-19!112;CL:0000134!7.00e-14!358;CL:0002320!3.70e-13!365;CL:0000219!1.03e-08!390;CL:0000791!1.99e-08!18;CL:0000789!1.99e-08!18;CL:0002420!1.99e-08!18;CL:0002419!1.99e-08!18;CL:0000790!1.99e-08!18;CL:0000048!2.45e-08!430;CL:0000723!2.73e-07!436;CL:0000838!9.08e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-19;33!CL:0002057;1.36e-19;33!CL:0000473;6.57e-17;39!CL:0000234;6.57e-17;39!CL:0000576;3.70e-16;48!CL:0000766;1.57e-14;69!CL:0002087;8.45e-10;104!CL:0000738;3.02e-09;136!CL:0000791;1.93e-08;18!CL:0000789;1.93e-08;18!CL:0002419;1.93e-08;18!CL:0000219;7.77e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.66e-41,136;CL:0000766,2.79e-33,72;CL:0002031,3.30e-33,120;CL:0002087,5.04e-30,115;CL:0000557,1.95e-29,67;CL:0000037,3.14e-29,168;CL:0000839,5.29e-28,66;CL:0000988,4.30e-27,177;CL:0002032,4.37e-27,161;CL:0000837,4.37e-27,161;CL:0000473,1.87e-26,48;CL:0000234,1.87e-26,48;CL:0002009,3.06e-26,61;CL:0000860,4.80e-26,42;CL:0002057,4.80e-26,42;CL:0002194,3.36e-25,59;CL:0000576,3.36e-25,59;CL:0000040,3.36e-25,59;CL:0000559,3.36e-25,59;CL:0000763,7.08e-21,108;CL:0000049,7.08e-21,108;CL:0000134,5.67e-15,354;CL:0002320,3.28e-14,361;CL:0000219,1.60e-09,386;CL:0000048,5.54e-09,427;CL:0000791,1.99e-08,18;CL:0000789,1.99e-08,18;CL:0002420,1.99e-08,18;CL:0002419,1.99e-08,18;CL:0000790,1.99e-08,18;CL:0000723,6.95e-08,433;CL:0000034,3.21e-07,441;CL:0000838,9.07e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;5.66e-19;42!CL:0000790;1.93e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.71e-32!102;UBERON:0003061!8.71e-32!102;UBERON:0002193!1.37e-29!112;UBERON:0002371!5.64e-24!80;UBERON:0001474!5.67e-22!86;UBERON:0004765!1.21e-21!101;UBERON:0001434!1.21e-21!101;UBERON:0007023!1.09e-20!115;UBERON:0002405!2.11e-14!115;UBERON:0002384!2.52e-12!375;UBERON:0001049!8.54e-12!57;UBERON:0005068!8.54e-12!57;UBERON:0006241!8.54e-12!57;UBERON:0007135!8.54e-12!57;UBERON:0002780!5.44e-11!41;UBERON:0001890!5.44e-11!41;UBERON:0006240!5.44e-11!41;UBERON:0003080!6.57e-11!42;UBERON:0002616!2.25e-10!59;UBERON:0000955!2.21e-09!69;UBERON:0006238!2.21e-09!69;UBERON:0002204!7.76e-09!167;UBERON:0001017!1.41e-08!82;UBERON:0001893!2.50e-08!34;UBERON:0002020!4.34e-08!34;UBERON:0003528!4.34e-08!34;UBERON:0002791!5.85e-08!33;UBERON:0001869!8.34e-08!32;UBERON:0005743!1.23e-07!86;UBERON:0000178!2.72e-07!15;UBERON:0000179!2.72e-07!15;UBERON:0000463!2.72e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.81e-08;41!UBERON:0001890;4.81e-08;41!UBERON:0001893;2.33e-07;34!UBERON:0000178;2.75e-07;15!UBERON:0000179;2.75e-07;15!UBERON:0000463;2.75e-07;15!UBERON:0003528;3.60e-07;34!UBERON:0002020;3.60e-07;34!UBERON:0001869;4.31e-07;32!UBERON:0000073;4.40e-07;53!UBERON:0002616;4.40e-07;53!UBERON:0002791;6.08e-07;32 | |||
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| ||
|short_description=p1@CYLD | |||
}} | }} |
Latest revision as of 21:14, 16 September 2015
Short description: | p1@CYLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYLD_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 10bp_to_ENST00000311559, ENST00000427738, ENST00000540145, NM_001042355, NM_015247, uc002egn.1, uc002ego.2, uc002egp.1, uc002egq.1, uc010cbs.1_5end |
EntrezGene: | CYLD |
HGNC: | 2584 |
UniProt: | Q9NQC7F5H2R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.16e-34 | 98 |
blood island | 2.16e-34 | 98 |
hemolymphoid system | 6.82e-32 | 108 |
bone marrow | 1.61e-26 | 76 |
immune system | 1.62e-25 | 93 |
bone element | 3.13e-24 | 82 |
skeletal element | 5.00e-23 | 90 |
skeletal system | 8.61e-23 | 100 |
adult organism | 1.65e-20 | 114 |
connective tissue | 2.49e-13 | 371 |
neural tube | 7.48e-12 | 56 |
neural rod | 7.48e-12 | 56 |
future spinal cord | 7.48e-12 | 56 |
neural keel | 7.48e-12 | 56 |
regional part of nervous system | 3.32e-11 | 53 |
regional part of brain | 3.32e-11 | 53 |
regional part of forebrain | 5.44e-11 | 41 |
forebrain | 5.44e-11 | 41 |
anterior neural tube | 5.44e-11 | 41 |
future forebrain | 5.44e-11 | 41 |
brain | 2.14e-09 | 68 |
future brain | 2.14e-09 | 68 |
musculoskeletal system | 3.76e-09 | 167 |
lateral plate mesoderm | 6.57e-09 | 203 |
central nervous system | 1.41e-08 | 81 |
telencephalon | 2.50e-08 | 34 |
brain grey matter | 4.33e-08 | 34 |
gray matter | 4.33e-08 | 34 |
cerebral hemisphere | 8.33e-08 | 32 |
regional part of telencephalon | 1.31e-07 | 32 |
blood | 2.71e-07 | 15 |
haemolymphatic fluid | 2.71e-07 | 15 |
organism substance | 2.71e-07 | 15 |