FFCP PHASE1:Hg19::chr2:128433361..128433386,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:128433361..128433386,- to FFCP PHASE1:Hg19::chr2:128433361..128433386,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55679 | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16084 | |HGNC=16084 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6E6 | |UniProt=F5H6E6 | ||
|association_with_transcript=0bp_to_ENST00000544917_5end | |||
|cluster_id=chr2:128433361..128433386,- | |||
|description=CAGE_peak_6_at_LIMS2_5end | |||
|id=chr2:128433361..128433386,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.00e-31!115;UBERON:0001049!5.89e-15!57;UBERON:0005068!5.89e-15!57;UBERON:0006241!5.89e-15!57;UBERON:0007135!5.89e-15!57;UBERON:0000955!3.63e-13!69;UBERON:0006238!3.63e-13!69;UBERON:0001017!3.73e-13!82;UBERON:0002616!7.00e-13!59;UBERON:0003080!1.47e-12!42;UBERON:0005743!1.50e-12!86;UBERON:0002020!3.30e-12!34;UBERON:0003528!3.30e-12!34;UBERON:0001893!3.32e-12!34;UBERON:0002791!5.69e-12!33;UBERON:0002780!5.94e-12!41;UBERON:0001890!5.94e-12!41;UBERON:0006240!5.94e-12!41;UBERON:0001869!1.80e-11!32;UBERON:0004111!5.97e-11!241;UBERON:0000025!7.37e-11!194;UBERON:0003075!8.27e-11!86;UBERON:0007284!8.27e-11!86;UBERON:0002346!2.43e-10!90;UBERON:0002619!4.11e-10!22;UBERON:0000073!4.97e-10!94;UBERON:0001016!4.97e-10!94;UBERON:0000477!5.78e-10!286;UBERON:0000468!4.71e-09!659;UBERON:0001950!7.42e-09!20;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0000475!4.02e-08!365;UBERON:0000062!8.28e-08!511;UBERON:0000467!2.80e-07!625;UBERON:0000480!3.63e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.80e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.25e-25,114;UBERON:0001049,2.38e-07,56;UBERON:0005068,2.38e-07,56;UBERON:0006241,2.38e-07,56;UBERON:0007135,2.38e-07,56;UBERON:0000073,2.48e-07,53;UBERON:0002616,2.48e-07,53;UBERON:0002780,2.72e-07,41;UBERON:0001890,2.72e-07,41;UBERON:0003080,2.72e-07,41;UBERON:0006240,2.72e-07,41;UBERON:0000955,4.10e-07,68;UBERON:0006238,4.10e-07,68;UBERON:0001893,7.12e-07,34 | |||
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| ||
|short_description=p6@LIMS2 | |||
}} | }} |
Latest revision as of 21:13, 16 September 2015
Short description: | p6@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000544917_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | F5H6E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.25e-25 | 114 |
neural tube | 2.38e-07 | 56 |
neural rod | 2.38e-07 | 56 |
future spinal cord | 2.38e-07 | 56 |
neural keel | 2.38e-07 | 56 |
regional part of nervous system | 2.48e-07 | 53 |
regional part of brain | 2.48e-07 | 53 |
regional part of forebrain | 2.72e-07 | 41 |
forebrain | 2.72e-07 | 41 |
anterior neural tube | 2.72e-07 | 41 |
future forebrain | 2.72e-07 | 41 |
brain | 4.10e-07 | 68 |
future brain | 4.10e-07 | 68 |
telencephalon | 7.12e-07 | 34 |