FFCP PHASE1:Hg19::chr6:167536230..167536251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1235 | |EntrezGene=1235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1607 | |HGNC=1607 | ||
|TSSclassifier=strong | |||
|UniProt=P51684 | |UniProt=P51684 | ||
|association_with_transcript=0bp_to_NM_031409,uc003qvn.3_5end | |association_with_transcript=0bp_to_NM_031409,uc003qvn.3_5end | ||
|cluster_id=chr6:167536230..167536251,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_5_at_CCR6_5end | |description=CAGE_peak_5_at_CCR6_5end | ||
|id=chr6:167536230..167536251,+ | |id=chr6:167536230..167536251,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.51e-22!24;CL:0000826!3.51e-22!24;CL:0000236!3.15e-21!14;CL:0000838!4.09e-20!52;CL:0000738!1.20e-19!140;CL:0000542!1.38e-19!53;CL:0000051!1.38e-19!53;CL:0000037!2.73e-17!172;CL:0000566!2.73e-17!172;CL:0002032!1.05e-16!165;CL:0000837!1.05e-16!165;CL:0002031!8.07e-16!124;CL:0002087!1.10e-15!119;CL:0000988!1.42e-15!182;CL:0000990!2.30e-14!8;CL:0000451!3.24e-14!10;CL:0000453!5.82e-11!5;CL:0000840!4.11e-09!5;CL:0001029!4.11e-09!5;CL:0000791!3.02e-07!18;CL:0000789!3.02e-07!18;CL:0002420!3.02e-07!18;CL:0002419!3.02e-07!18;CL:0000790!3.02e-07!18 | |ontology_enrichment_celltype=CL:0000945!3.51e-22!24;CL:0000826!3.51e-22!24;CL:0000236!3.15e-21!14;CL:0000838!4.09e-20!52;CL:0000738!1.20e-19!140;CL:0000542!1.38e-19!53;CL:0000051!1.38e-19!53;CL:0000037!2.73e-17!172;CL:0000566!2.73e-17!172;CL:0002032!1.05e-16!165;CL:0000837!1.05e-16!165;CL:0002031!8.07e-16!124;CL:0002087!1.10e-15!119;CL:0000988!1.42e-15!182;CL:0000990!2.30e-14!8;CL:0000451!3.24e-14!10;CL:0000453!5.82e-11!5;CL:0000840!4.11e-09!5;CL:0001029!4.11e-09!5;CL:0000791!3.02e-07!18;CL:0000789!3.02e-07!18;CL:0002420!3.02e-07!18;CL:0002419!3.02e-07!18;CL:0000790!3.02e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.52e-42;13!CL:0000945;7.88e-35;24!CL:0000990;3.39e-23;8!CL:0000451;8.12e-19;10!CL:0000840;2.55e-18;5!CL:0000453;1.02e-14;5!CL:0000542;2.87e-14;53!CL:0001014;2.67e-10;2!CL:0001016;2.67e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.83e-39,14;CL:0000945,7.11e-35,24;CL:0000826,7.11e-35,24;CL:0000990,2.81e-23,8;CL:0000838,1.19e-21,52;CL:0000542,3.62e-21,53;CL:0000051,3.62e-21,53;CL:0000451,6.97e-19,10;CL:0000840,2.20e-18,5;CL:0001029,2.20e-18,5;CL:0000453,9.30e-15,5;CL:0000738,1.73e-13,136;CL:0002031,4.61e-13,120;CL:0002032,6.55e-13,161;CL:0000837,6.55e-13,161;CL:0000037,3.95e-12,168;CL:0000988,3.22e-11,177;CL:0002087,5.09e-11,115;CL:0001014,2.55e-10,2;CL:0001016,2.55e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.87e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.36e-11!115;UBERON:0002193!1.17e-07!112;UBERON:0000178!1.83e-07!15;UBERON:0000179!1.83e-07!15;UBERON:0000463!1.83e-07!15;UBERON:0002390!2.03e-07!102;UBERON:0003061!2.03e-07!102;UBERON:0004177!4.83e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.36e-11!115;UBERON:0002193!1.17e-07!112;UBERON:0000178!1.83e-07!15;UBERON:0000179!1.83e-07!15;UBERON:0000463!1.83e-07!15;UBERON:0002390!2.03e-07!102;UBERON:0003061!2.03e-07!102;UBERON:0004177!4.83e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@CCR6 | |short_description=p5@CCR6 | ||
}} | }} |
Latest revision as of 21:09, 16 September 2015
Short description: | p5@CCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCR6_5end |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | 0bp_to_NM_031409, uc003qvn.3_5end |
EntrezGene: | CCR6 |
HGNC: | 1607 |
UniProt: | P51684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.83e-39 | 14 |
lymphocyte of B lineage | 7.11e-35 | 24 |
pro-B cell | 7.11e-35 | 24 |
conventional dendritic cell | 2.81e-23 | 8 |
lymphoid lineage restricted progenitor cell | 1.19e-21 | 52 |
lymphocyte | 3.62e-21 | 53 |
common lymphoid progenitor | 3.62e-21 | 53 |
dendritic cell | 6.97e-19 | 10 |
immature conventional dendritic cell | 2.20e-18 | 5 |
common dendritic progenitor | 2.20e-18 | 5 |
Langerhans cell | 9.30e-15 | 5 |
leukocyte | 1.73e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 4.61e-13 | 120 |
hematopoietic oligopotent progenitor cell | 6.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.55e-13 | 161 |
hematopoietic stem cell | 3.95e-12 | 168 |
hematopoietic cell | 3.22e-11 | 177 |
nongranular leukocyte | 5.09e-11 | 115 |
CD1a-positive Langerhans cell | 2.55e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.55e-10 | 2 |