FFCP PHASE1:Hg19::chr12:121342097..121342122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121665 | |EntrezGene=121665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc001tzd.2,uc009zwz.2_5end | |association_with_transcript=28bp_to_uc001tzd.2,uc009zwz.2_5end | ||
|cluster_id=chr12:121342097..121342122,- | |||
|description=CAGE_peak_2_at_SPPL3_5end | |description=CAGE_peak_2_at_SPPL3_5end | ||
|id=chr12:121342097..121342122,- | |id=chr12:121342097..121342122,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-19!115;UBERON:0000922!1.94e-11!612;UBERON:0000468!6.19e-11!659;UBERON:0000480!3.48e-10!626;UBERON:0000467!3.63e-10!625;UBERON:0002050!5.76e-10!605;UBERON:0005423!5.76e-10!605;UBERON:0004111!5.85e-10!241;UBERON:0000923!1.04e-09!604;UBERON:0005291!1.04e-09!604;UBERON:0006598!1.04e-09!604;UBERON:0002532!1.04e-09!604;UBERON:0001049!4.75e-08!57;UBERON:0005068!4.75e-08!57;UBERON:0006241!4.75e-08!57;UBERON:0007135!4.75e-08!57;UBERON:0000477!2.74e-07!286;UBERON:0000178!2.89e-07!15;UBERON:0000179!2.89e-07!15;UBERON:0000463!2.89e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.87e-07;15!UBERON:0000179;2.87e-07;15!UBERON:0000463;2.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.53e-19,114;UBERON:0000922,9.75e-11,592;UBERON:0004111,6.25e-10,240;UBERON:0005423,1.00e-09,581;UBERON:0002050,1.37e-09,564;UBERON:0000923,1.58e-09,560;UBERON:0010316,1.58e-09,560;UBERON:0005291,1.58e-09,560;UBERON:0006598,1.58e-09,560;UBERON:0010317,1.58e-09,560;UBERON:0002532,1.58e-09,560;UBERON:0001049,1.14e-07,56;UBERON:0005068,1.14e-07,56;UBERON:0006241,1.14e-07,56;UBERON:0007135,1.14e-07,56;UBERON:0000178,2.89e-07,15;UBERON:0000179,2.89e-07,15;UBERON:0000463,2.89e-07,15;UBERON:0011216,6.25e-07,223;UBERON:0010371,9.28e-07,104 | |||
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929218729 | ||
|short_description=p2@SPPL3 | |short_description=p2@SPPL3 | ||
}} | }} |
Latest revision as of 21:02, 16 September 2015
Short description: | p2@SPPL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPPL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_uc001tzd.2, uc009zwz.2_5end |
EntrezGene: | SPPL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.53e-19 | 114 |
embryo | 9.75e-11 | 592 |
anatomical conduit | 6.25e-10 | 240 |
developing anatomical structure | 1.00e-09 | 581 |
embryonic structure | 1.37e-09 | 564 |
germ layer | 1.58e-09 | 560 |
germ layer / neural crest | 1.58e-09 | 560 |
embryonic tissue | 1.58e-09 | 560 |
presumptive structure | 1.58e-09 | 560 |
germ layer / neural crest derived structure | 1.58e-09 | 560 |
epiblast (generic) | 1.58e-09 | 560 |
neural tube | 1.14e-07 | 56 |
neural rod | 1.14e-07 | 56 |
future spinal cord | 1.14e-07 | 56 |
neural keel | 1.14e-07 | 56 |
blood | 2.89e-07 | 15 |
haemolymphatic fluid | 2.89e-07 | 15 |
organism substance | 2.89e-07 | 15 |
organ system subdivision | 6.25e-07 | 223 |
ecto-epithelium | 9.28e-07 | 104 |