FFCP PHASE1:Hg19::chr20:48808740..48808743,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:48808740..48808743,+ to FFCP PHASE1:Hg19::chr20:48808740..48808743,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1051 | |EntrezGene=1051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1834 | |HGNC=1834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_M98056_5end | |||
|cluster_id=chr20:48808740..48808743,+ | |||
|description=CAGE_peak_25_at_CEBPB_5end | |||
|id=chr20:48808740..48808743,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.92e-23!76;CL:0002057!2.08e-23!42;CL:0000860!9.57e-23!45;CL:0002194!9.97e-22!63;CL:0000576!9.97e-22!63;CL:0000040!9.97e-22!63;CL:0000559!9.97e-22!63;CL:0000839!8.98e-21!70;CL:0002009!2.39e-20!65;CL:0000557!4.89e-19!71;CL:0000763!6.83e-11!112;CL:0000049!6.83e-11!112;CL:0002087!2.98e-08!119;CL:0000738!3.50e-08!140;CL:0002031!5.24e-08!124;CL:0000548!6.53e-07!679;CL:0000004!6.53e-07!679;CL:0000255!6.53e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-50;33!CL:0002057;1.55e-50;33!CL:0000473;6.40e-35;39!CL:0000234;6.40e-35;39!CL:0000576;8.73e-29;48!CL:0000766;6.46e-20;69!CL:0000775;6.05e-14;3!CL:0000763;2.18e-09;100!CL:0000094;4.72e-09;8!CL:0002617;8.94e-09;2!CL:0002087;1.79e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.06e-43,42;CL:0002057,4.06e-43,42;CL:0000473,1.77e-40,48;CL:0000234,1.77e-40,48;CL:0000766,1.32e-38,72;CL:0002194,2.69e-34,59;CL:0000576,2.69e-34,59;CL:0000040,2.69e-34,59;CL:0000559,2.69e-34,59;CL:0002009,5.39e-33,61;CL:0000839,4.42e-30,66;CL:0000557,1.50e-29,67;CL:0000763,1.47e-23,108;CL:0000049,1.47e-23,108;CL:0000738,2.42e-17,136;CL:0002087,7.17e-15,115;CL:0000775,4.51e-14,3;CL:0002031,5.11e-14,120;CL:0002032,1.26e-13,161;CL:0000837,1.26e-13,161;CL:0000037,8.71e-13,168;CL:0000988,8.34e-12,177;CL:0000134,1.00e-09,354;CL:0000219,1.46e-09,386;CL:0002320,2.29e-09,361;CL:0000094,4.14e-09,8;CL:0002617,1.01e-08,2;CL:0000048,3.48e-07,427;CL:0000723,5.80e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-33;42!CL:0000049;1.08e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.86e-17!80;UBERON:0001474!2.95e-16!86;UBERON:0002390!1.71e-14!102;UBERON:0003061!1.71e-14!102;UBERON:0004765!2.35e-14!101;UBERON:0001434!2.35e-14!101;UBERON:0002405!9.61e-14!115;UBERON:0002193!4.43e-13!112;UBERON:0002204!1.00e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.15e-25,76;UBERON:0001474,3.99e-23,82;UBERON:0004765,1.44e-20,90;UBERON:0002405,1.01e-19,93;UBERON:0002390,1.99e-18,98;UBERON:0003061,1.99e-18,98;UBERON:0001434,6.02e-18,100;UBERON:0002193,3.36e-16,108;UBERON:0002204,1.94e-09,167;UBERON:0002384,7.05e-09,371;UBERON:0003081,2.26e-08,203 | |||
|phase1_expression=1.09007027562334,1.2846031433459,0.986680828671798,1.0007329835313,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,0.293600439334847,0.553995408531877,0,0.434021741431704,2.46307021663917,0,0.515151135268373,2.18097358169347,2.26725566213286,0.485168122375632,0.697287110717054,2.46700732813095,3.40677007984614,3.16461631554365,2.56160706529101,1.89185783910868,0.689491361473237,0.645484683583826,0,4.70605848856512,3.82068610080984,2.02251136000576,2.14258724659632,2.24650318953266,0.639337125799041,1.31940520074686,2.59302754908121,0.852449501065388,1.7412554317715,1.70215567407342,0,2.00998932205395,3.12889751052121,3.04064382587163,1.81619850790011,1.47311054395026,2.21523671208619,0.845021145247767,0,0.628975936525128,0.561643155732475,0.901061357049038,0.32145117339416,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.511450247374121,0.722878304769133,0,0.579386075843295,0,0.486634870302636,0.189069634328136,0,0,0,0.364295288292542,0.370784442784429,0.649094787309367,0.522389211897802,0.664789802594326,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.989067717114227,0,0,0,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0,0,0.213557388818567,0.635795703478686,0,0,0,0,0.168776332241266,0.194874010322397,0,0.368199594569197,0.323292113637624,0.355009592516614,0,0.169560592310488,0.386521706326594,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,1.96565443335525,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0.246217006087397,0.936017060556951,0,0.93733833986777,0,0,0.179117045405697,0.581267877027924,0,0,0.264145302039678,0,0.288239906833923,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,2.17048642156577,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0,0.199945982364114,0,1.00451418286425,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,6.74106321552464,5.9832291840805,2.90090859405225,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0,0,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.391602314925481,0,0.413536052245775,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0.992431231275107,0.153461973288062,0.280660094433074,1.02511319404561,1.02341449813341,0.321707842287215,0,0,0,0.164254312027618,0,0.232420756919918,0,0.40101294060657,0.276242966807689,0,0.182091168006717,0.131124414959424,0.902399225814824,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0,0,0.330569830721956,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0.54907405947211,0,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0.709522128141196,0,0,0,0,0.48111056362756,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0.111443384277478,0,1.19372242368845,0.296964680832639,0.307160702099232,0,0,1.11308705022906,0.494411622680279,0,0,0,0,0,0,0.311039587661807,0.179736702294654,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.278847488557207,0.0769502585037971,1.02547850262301,0,0.448788222048861,0.217294743844016,0,0.457987967009312,0,0,0,0,0,0,0,0.37950746544837,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.1935126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| 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| ||
|short_description=p25@CEBPB | |||
}} | }} |
Latest revision as of 21:01, 16 September 2015
Short description: | p25@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CEBPB_5end |
Coexpression cluster: | NA |
Association with transcript: | -95bp_to_M98056_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.06e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-43 | 42 |
defensive cell | 1.77e-40 | 48 |
phagocyte | 1.77e-40 | 48 |
myeloid leukocyte | 1.32e-38 | 72 |
monopoietic cell | 2.69e-34 | 59 |
monocyte | 2.69e-34 | 59 |
monoblast | 2.69e-34 | 59 |
promonocyte | 2.69e-34 | 59 |
macrophage dendritic cell progenitor | 5.39e-33 | 61 |
myeloid lineage restricted progenitor cell | 4.42e-30 | 66 |
granulocyte monocyte progenitor cell | 1.50e-29 | 67 |
myeloid cell | 1.47e-23 | 108 |
common myeloid progenitor | 1.47e-23 | 108 |
leukocyte | 2.42e-17 | 136 |
nongranular leukocyte | 7.17e-15 | 115 |
neutrophil | 4.51e-14 | 3 |
hematopoietic lineage restricted progenitor cell | 5.11e-14 | 120 |
hematopoietic oligopotent progenitor cell | 1.26e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-13 | 161 |
hematopoietic stem cell | 8.71e-13 | 168 |
hematopoietic cell | 8.34e-12 | 177 |
mesenchymal cell | 1.00e-09 | 354 |
motile cell | 1.46e-09 | 386 |
connective tissue cell | 2.29e-09 | 361 |
granulocyte | 4.14e-09 | 8 |
adipocyte of breast | 1.01e-08 | 2 |
multi fate stem cell | 3.48e-07 | 427 |
somatic stem cell | 5.80e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.15e-25 | 76 |
bone element | 3.99e-23 | 82 |
skeletal element | 1.44e-20 | 90 |
immune system | 1.01e-19 | 93 |
hematopoietic system | 1.99e-18 | 98 |
blood island | 1.99e-18 | 98 |
skeletal system | 6.02e-18 | 100 |
hemolymphoid system | 3.36e-16 | 108 |
musculoskeletal system | 1.94e-09 | 167 |
connective tissue | 7.05e-09 | 371 |
lateral plate mesoderm | 2.26e-08 | 203 |