FFCP PHASE1:Hg19::chr16:50715147..50715154,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124460 | |EntrezGene=124460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30390 | |HGNC=30390 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z614 | |UniProt=Q7Z614 | ||
|association_with_transcript=68bp_to_ENST00000330943_5end | |association_with_transcript=68bp_to_ENST00000330943_5end | ||
|cluster_id=chr16:50715147..50715154,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_SNX20_5end | |description=CAGE_peak_4_at_SNX20_5end | ||
|id=chr16:50715147..50715154,- | |id=chr16:50715147..50715154,- | ||
|ontology_enrichment_celltype=CL:0000738!1.82e-67!140;CL:0000037!3.17e-59!172;CL:0000566!3.17e-59!172;CL:0002032!1.22e-57!165;CL:0000837!1.22e-57!165;CL:0002031!1.65e-54!124;CL:0000988!1.67e-54!182;CL:0002057!2.25e-53!42;CL:0000766!3.80e-52!76;CL:0002087!5.75e-52!119;CL:0000557!2.11e-49!71;CL:0000860!6.81e-49!45;CL:0000763!1.02e-46!112;CL:0000049!1.02e-46!112;CL:0002009!4.14e-46!65;CL:0000839!8.55e-46!70;CL:0002194!2.07e-43!63;CL:0000576!2.07e-43!63;CL:0000040!2.07e-43!63;CL:0000559!2.07e-43!63;CL:0000134!4.48e-15!358;CL:0002393!5.90e-15!9;CL:0002397!5.90e-15!9;CL:0002320!2.52e-14!365;CL:0000219!1.03e-11!390;CL:0000542!4.08e-10!53;CL:0000051!4.08e-10!53;CL:0000838!1.81e-09!52;CL:0000048!1.10e-08!430;CL:0000034!1.15e-08!444;CL:0000453!2.63e-08!5;CL:0000723!2.89e-08!436;CL:0000990!5.99e-08!8;CL:0000791!1.22e-07!18;CL:0000789!1.22e-07!18;CL:0002420!1.22e-07!18;CL:0002419!1.22e-07!18;CL:0000790!1.22e-07!18 | |ontology_enrichment_celltype=CL:0000738!1.82e-67!140;CL:0000037!3.17e-59!172;CL:0000566!3.17e-59!172;CL:0002032!1.22e-57!165;CL:0000837!1.22e-57!165;CL:0002031!1.65e-54!124;CL:0000988!1.67e-54!182;CL:0002057!2.25e-53!42;CL:0000766!3.80e-52!76;CL:0002087!5.75e-52!119;CL:0000557!2.11e-49!71;CL:0000860!6.81e-49!45;CL:0000763!1.02e-46!112;CL:0000049!1.02e-46!112;CL:0002009!4.14e-46!65;CL:0000839!8.55e-46!70;CL:0002194!2.07e-43!63;CL:0000576!2.07e-43!63;CL:0000040!2.07e-43!63;CL:0000559!2.07e-43!63;CL:0000134!4.48e-15!358;CL:0002393!5.90e-15!9;CL:0002397!5.90e-15!9;CL:0002320!2.52e-14!365;CL:0000219!1.03e-11!390;CL:0000542!4.08e-10!53;CL:0000051!4.08e-10!53;CL:0000838!1.81e-09!52;CL:0000048!1.10e-08!430;CL:0000034!1.15e-08!444;CL:0000453!2.63e-08!5;CL:0000723!2.89e-08!436;CL:0000990!5.99e-08!8;CL:0000791!1.22e-07!18;CL:0000789!1.22e-07!18;CL:0002420!1.22e-07!18;CL:0002419!1.22e-07!18;CL:0000790!1.22e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-53;33!CL:0002057;1.35e-53;33!CL:0000576;1.11e-44;48!CL:0000473;1.35e-35;39!CL:0000234;1.35e-35;39!CL:0000766;2.42e-30;69!CL:0000875;1.85e-17;3!CL:0002396;1.85e-17;3!CL:0000763;1.78e-16;100!CL:0000094;1.68e-11;8!CL:0002087;3.69e-10;104!CL:0000738;4.10e-10;136!CL:0002393;4.57e-09;6!CL:0002397;4.57e-09;6!CL:0000775;1.43e-08;3!CL:0000081;2.16e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.45e-79,42;CL:0002057,3.45e-79,42;CL:0000473,1.21e-68,48;CL:0000234,1.21e-68,48;CL:0000766,4.33e-64,72;CL:0002194,7.11e-54,59;CL:0000576,7.11e-54,59;CL:0000040,7.11e-54,59;CL:0000559,7.11e-54,59;CL:0002009,5.73e-52,61;CL:0000839,8.61e-52,66;CL:0000557,5.96e-51,67;CL:0000763,5.32e-41,108;CL:0000049,5.32e-41,108;CL:0000738,8.75e-34,136;CL:0002031,1.54e-28,120;CL:0002032,1.21e-27,161;CL:0000837,1.21e-27,161;CL:0002087,1.35e-27,115;CL:0000037,3.00e-26,168;CL:0000988,1.29e-24,177;CL:0002393,4.18e-22,9;CL:0002397,4.18e-22,9;CL:0000875,1.61e-17,3;CL:0002396,1.61e-17,3;CL:0000094,1.26e-11,8;CL:0000134,2.85e-09,354;CL:0002320,5.69e-09,361;CL:0000775,1.43e-08,3;CL:0000081,1.76e-08,11;CL:0000219,6.49e-08,386;CL:0000034,6.46e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-56;42!CL:0000049;3.41e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.00e-45!102;UBERON:0003061!4.00e-45!102;UBERON:0002193!1.31e-42!112;UBERON:0002371!5.53e-42!80;UBERON:0001474!6.60e-38!86;UBERON:0002405!8.43e-32!115;UBERON:0004765!7.32e-30!101;UBERON:0001434!7.32e-30!101;UBERON:0002384!7.64e-14!375;UBERON:0003081!3.97e-13!216;UBERON:0002204!4.21e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.29e-44,76;UBERON:0001474,9.04e-41,82;UBERON:0004765,1.04e-36,90;UBERON:0002405,2.29e-35,93;UBERON:0002390,2.63e-33,98;UBERON:0003061,2.63e-33,98;UBERON:0001434,1.54e-32,100;UBERON:0002193,9.40e-30,108;UBERON:0002204,2.17e-17,167;UBERON:0003081,2.34e-13,203;UBERON:0002384,1.46e-08,371 | |||
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|short_description=p4@SNX20 | |short_description=p4@SNX20 | ||
}} | }} |
Latest revision as of 20:59, 16 September 2015
Short description: | p4@SNX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX20_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 68bp_to_ENST00000330943_5end |
EntrezGene: | SNX20 |
HGNC: | 30390 |
UniProt: | Q7Z614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.29e-44 | 76 |
bone element | 9.04e-41 | 82 |
skeletal element | 1.04e-36 | 90 |
immune system | 2.29e-35 | 93 |
hematopoietic system | 2.63e-33 | 98 |
blood island | 2.63e-33 | 98 |
skeletal system | 1.54e-32 | 100 |
hemolymphoid system | 9.40e-30 | 108 |
musculoskeletal system | 2.17e-17 | 167 |
lateral plate mesoderm | 2.34e-13 | 203 |
connective tissue | 1.46e-08 | 371 |