FFCP PHASE1:Hg19::chr17:63557759..63557774,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8313 | |EntrezGene=8313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=904 | |HGNC=904 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2T1 | |UniProt=Q9Y2T1 | ||
|association_with_transcript=0bp_to_ENST00000307078_5end | |association_with_transcript=0bp_to_ENST00000307078_5end | ||
|cluster_id=chr17:63557759..63557774,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_4_at_AXIN2_5end | |description=CAGE_peak_4_at_AXIN2_5end | ||
|id=chr17:63557759..63557774,- | |id=chr17:63557759..63557774,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000453;9.60e-12;5!CL:0002563;8.03e-09;4!CL:0002253;2.05e-08;2!CL:0000039;5.31e-08;7!CL:0000586;5.31e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.24e-11,5;CL:0002563,8.63e-09,4;CL:0002253,2.07e-08,2;CL:0000039,3.94e-08,7;CL:0000586,3.94e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.17e-08;10!UBERON:0005564;3.17e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.23e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.38e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.45e-18!57;UBERON:0005068!2.45e-18!57;UBERON:0006241!2.45e-18!57;UBERON:0007135!2.45e-18!57;UBERON:0001017!7.85e-17!82;UBERON:0005743!7.72e-16!86;UBERON:0002616!2.88e-14!59;UBERON:0002020!3.17e-14!34;UBERON:0003528!3.17e-14!34;UBERON:0001893!6.68e-14!34;UBERON:0000073!1.15e-13!94;UBERON:0001016!1.15e-13!94;UBERON:0002791!1.48e-13!33;UBERON:0001869!7.62e-13!32;UBERON:0000955!1.98e-12!69;UBERON:0006238!1.98e-12!69;UBERON:0002346!1.41e-11!90;UBERON:0003075!5.87e-11!86;UBERON:0007284!5.87e-11!86;UBERON:0002780!6.23e-11!41;UBERON:0001890!6.23e-11!41;UBERON:0006240!6.23e-11!41;UBERON:0007023!8.84e-11!115;UBERON:0003080!1.97e-10!42;UBERON:0003076!3.32e-10!15;UBERON:0003057!3.32e-10!15;UBERON:0000956!2.36e-09!25;UBERON:0000203!2.36e-09!25;UBERON:0002619!3.31e-09!22;UBERON:0004733!6.49e-09!12;UBERON:0002028!6.49e-09!12;UBERON:0007277!6.49e-09!12;UBERON:0004732!6.56e-08!13;UBERON:0001950!6.88e-08!20;UBERON:0000924!2.28e-07!173;UBERON:0006601!2.28e-07!173;UBERON:0004121!6.96e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!2.45e-18!57;UBERON:0005068!2.45e-18!57;UBERON:0006241!2.45e-18!57;UBERON:0007135!2.45e-18!57;UBERON:0001017!7.85e-17!82;UBERON:0005743!7.72e-16!86;UBERON:0002616!2.88e-14!59;UBERON:0002020!3.17e-14!34;UBERON:0003528!3.17e-14!34;UBERON:0001893!6.68e-14!34;UBERON:0000073!1.15e-13!94;UBERON:0001016!1.15e-13!94;UBERON:0002791!1.48e-13!33;UBERON:0001869!7.62e-13!32;UBERON:0000955!1.98e-12!69;UBERON:0006238!1.98e-12!69;UBERON:0002346!1.41e-11!90;UBERON:0003075!5.87e-11!86;UBERON:0007284!5.87e-11!86;UBERON:0002780!6.23e-11!41;UBERON:0001890!6.23e-11!41;UBERON:0006240!6.23e-11!41;UBERON:0007023!8.84e-11!115;UBERON:0003080!1.97e-10!42;UBERON:0003076!3.32e-10!15;UBERON:0003057!3.32e-10!15;UBERON:0000956!2.36e-09!25;UBERON:0000203!2.36e-09!25;UBERON:0002619!3.31e-09!22;UBERON:0004733!6.49e-09!12;UBERON:0002028!6.49e-09!12;UBERON:0007277!6.49e-09!12;UBERON:0004732!6.56e-08!13;UBERON:0001950!6.88e-08!20;UBERON:0000924!2.28e-07!173;UBERON:0006601!2.28e-07!173;UBERON:0004121!6.96e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.26e-10;8!UBERON:0000922;1.22e-09;49!UBERON:0001052;8.03e-09;4!UBERON:0001242;8.03e-09;4!UBERON:0001262;8.03e-09;4!UBERON:0004786;8.03e-09;4!UBERON:0004808;8.03e-09;4!UBERON:0001277;8.03e-09;4!UBERON:0003135;1.91e-07;11!UBERON:0004907;4.04e-07;5!UBERON:0003528;4.50e-07;34!UBERON:0002020;4.50e-07;34!UBERON:0000073;8.99e-07;53!UBERON:0002616;8.99e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.57e-11,56;UBERON:0005068,8.57e-11,56;UBERON:0006241,8.57e-11,56;UBERON:0007135,8.57e-11,56;UBERON:0000473,2.17e-10,8;UBERON:0000073,4.62e-10,53;UBERON:0002616,4.62e-10,53;UBERON:0001017,1.57e-09,81;UBERON:0011216,3.82e-09,223;UBERON:0001052,7.59e-09,4;UBERON:0001242,8.63e-09,4;UBERON:0001262,8.63e-09,4;UBERON:0004786,8.63e-09,4;UBERON:0004808,8.63e-09,4;UBERON:0001277,8.63e-09,4;UBERON:0000955,3.30e-08,68;UBERON:0006238,3.30e-08,68;UBERON:0001016,3.57e-08,89;UBERON:0003528,1.46e-07,34;UBERON:0002020,1.46e-07,34;UBERON:0003135,1.86e-07,11;UBERON:0004907,3.86e-07,5;UBERON:0003076,4.63e-07,15;UBERON:0003057,4.63e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.612002073732759,0.313454721478088,0.286235987131057,0.410623275218653,0,0.61130724598361,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27685187643779,0,0.382273228125229,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0.443067789167242,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0.821127996921047,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.589405839739707,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,1.34171076742555,0.662648841607426,0.580969714347592,0.932949495138334,1.00928340350251,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,3.07471096357784,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.6312121671319,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,1.30139853857622,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0.206768026122887,0,0.106727557803444,0.606255142892519,0,0,0.248107807818777,0.306923946576125,0,0,0,0,1.48418066444991,0,0,0,0,0,0.604297247958111,0,0,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.618246069886334,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0.822724546172388,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.09224469574562,0,3.40963376167696,0.47748896947538,0.593929361665277,0.614321404198464,0,1.40669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0,7.98455192004777,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0.520874984799877,1.77148277162768,0.361789315876224,1.52581736317083,1.10579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0.455768223388005,0,0.179515288819544,0.217294743844016,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.210998064528027,0,4.66465135732005,91.0996173314204,0,0,0,0,0.123563938946503,0,0.471807930864739,0.802577647298789,0,0,0,0,0,0,4.59109142445735,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,1.04135843001079,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0.240476460754601,0,0,0,1.71804894248874,1.54435498075768,0,0,0,0.135904206073614,0,0.101998217636322,0,1.20084057741958,0.958337652243951,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,1.16495949527454,1.18174773460835,1.07140615895516,0.808842526250219,0.196854963029498,0,0.795229689809303,1.22583065500418,0.643012593860077,0.412618309791701,1.24632101408756,1.1248694577575,0,0.485996453264197,0,0,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.387848869084652,1.19009341568421,0,0,0.640724475406168,1.72924735609633,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,1.09937867375164,0.886068179966986,0.488105059607853,0.625954653532499,1.14681839138014,1.33114861844223,0.683060432355218,0,0,0.151649117541648,0,0,0.468334905806882,0.28984205722165,0.298509605773748,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0,1.24432592536558,49.2996581363653,27.3701571045528,14.0666239060026,0,0,0,0,0,0,0,0.368211900503681,0,2.48830904013189,0,0.107824811396682,0,0.218419276384028,0,0.637724760305049,0.247871528518004,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0.957803154342908,0,4.7893622282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| ||
|short_description=p4@AXIN2 | |short_description=p4@AXIN2 | ||
}} | }} |
Latest revision as of 20:53, 16 September 2015
Short description: | p4@AXIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AXIN2_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 0bp_to_ENST00000307078_5end |
EntrezGene: | AXIN2 |
HGNC: | 904 |
UniProt: | Q9Y2T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.24e-11 | 5 |
intestinal epithelial cell | 8.63e-09 | 4 |
epithelial cell of large intestine | 2.07e-08 | 2 |
germ line cell | 3.94e-08 | 7 |
germ cell | 3.94e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.57e-11 | 56 |
neural rod | 8.57e-11 | 56 |
future spinal cord | 8.57e-11 | 56 |
neural keel | 8.57e-11 | 56 |
testis | 2.17e-10 | 8 |
regional part of nervous system | 4.62e-10 | 53 |
regional part of brain | 4.62e-10 | 53 |
central nervous system | 1.57e-09 | 81 |
organ system subdivision | 3.82e-09 | 223 |
rectum | 7.59e-09 | 4 |
intestinal mucosa | 8.63e-09 | 4 |
wall of intestine | 8.63e-09 | 4 |
gastrointestinal system mucosa | 8.63e-09 | 4 |
gastrointestinal system epithelium | 8.63e-09 | 4 |
intestinal epithelium | 8.63e-09 | 4 |
brain | 3.30e-08 | 68 |
future brain | 3.30e-08 | 68 |
nervous system | 3.57e-08 | 89 |
brain grey matter | 1.46e-07 | 34 |
gray matter | 1.46e-07 | 34 |
male reproductive organ | 1.86e-07 | 11 |
lower digestive tract | 3.86e-07 | 5 |
posterior neural tube | 4.63e-07 | 15 |
chordal neural plate | 4.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.38e-08 | 14 |