FFCP PHASE1:Hg19::chr4:175443788..175443795,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3248 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5154 | |||
|TSSclassifier=strong | |||
|UniProt=E9PD69,B4DU74,P15428,B4DV57 | |||
|association_with_transcript=0bp_to_ENST00000508330,ENST00000541923,NM_000860,NM_001145816,uc003itu.2,uc003itv.2,uc003itw.2,uc003itx.2,uc010irp.2,uc010irq.2,uc011ckf.1,uc011ckg.1_5end | |||
|cluster_id=chr4:175443788..175443795,- | |||
|coexpression_cluster_id=C2787 | |||
|description=CAGE_peak_2_at_HPGD_5end | |||
|id=chr4:175443788..175443795,- | |||
|ontology_enrichment_celltype=CL:0002274!1.63e-07!5;CL:0000457!1.63e-07!5;CL:0002191!1.63e-07!5;CL:0000097!1.63e-07!5;CL:0000831!1.63e-07!5;CL:0002028!1.63e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.88e-15;5!CL:0002541;2.11e-09;3!CL:0000163;4.97e-08;9!CL:0002322;9.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.85e-15,5;CL:0002028,6.85e-15,5;CL:0002541,2.04e-09,3;CL:0000163,4.96e-08,9;CL:0002322,9.82e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.04e-09!129;UBERON:0004185!8.04e-09!129;UBERON:0001007!3.89e-08!155;UBERON:0001555!3.89e-08!155;UBERON:0007026!3.89e-08!155;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169;UBERON:0000077!4.16e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.08e-12;22!UBERON:0000160;1.27e-10;17!UBERON:0004921;2.26e-10;33!UBERON:0003124;2.11e-09;3!UBERON:0000920;2.11e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-10,17;UBERON:0005409,3.67e-10,25;UBERON:0000920,2.04e-09,3;UBERON:0003124,8.72e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0.512321413058201,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0.668745981562712,0.32592226663359,0,0,1.89397776704795,6.18672405697158,1.99380505125259,3.24964636518019,2.43373507478783,3.77172107923647,0.657751618414705,1.65810010671509,1.44901542867526,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0.451725357233318,0.639933055772092,0,0.710331756132051,0,0,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.795178609928912,1.74290914304278,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0.709840800239063,0.842923450390509,0.241011029883482,0.441175890929576,0.435758888184812,0.71181185733329,0.404493924480493,0.196221465125346,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,1.35287282397425,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0.290633938513962,0,21.6771824674215,20.6913819931081,17.6228898209656,15.132595108781,15.6540617448711,0.444485260045183,0.381988425558278,0,0,0.719792448923265,0,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.336255431980582,0,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0.261435451024901,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0.490080431962063,0,0,0,1.75368900001705,0.59873811429845,2.8725805519855,1.05836791361941,0,0,0,0,0,1.35433422241283,0,0,0.851692475380653,0,0,0,0,0,9.187403738543,0,0,0.66614393599564,0,3.18138918693974,0.293016358543788,0,0,0,3.81991175580304,0,0,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0,0,0,0.269605053441981,0,0,1.1837208676432,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,3.62501735124369,1.46205491157214,0,0.23056390438806,0,0.217294743844016,13.7170498684725,4.8546724502987,28.7838779050063,0,0.941881538370149,12.6320878244119,0,0.19606253431774,0.335643173951685,0.189753732724185,5.08597052737212,0,0,3.39247371441458,0,3.98104772431402,14.5070405785476,3.05515072466813,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,7.25944296291983,0,0.442306057399416,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.0967563312890851,0,0,1.84279131327997,0,0,0,0,0,6.4531956302485,0.0801588202515337,0.640358984218058,0.19980960958213,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.78741985211799,0,0,0,0.482259445395058,0.550157746388935,0.83088067605837,1.799791132412,0.77380195455795,0,1.0063040627978,1.18208560948797,0.786818822024972,0,0,0,0,0,0,0,0,0.326587360109409,0,7.63460442968852,0,0,3.95691030930823,1.32506888912221,0,0.13223260174269,1.19760786519031,0,0.961086713109252,0.628817220398664,0.828478110694391,0.992332043623902,0.197611631897944,0,0,1.08803560673895,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0.665574309221114,0.124192805882767,0,0,2.72968411574966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0.779441235357554,1.46151324344699,0.490696182767533,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87023701626388,0,0,0,0.0657727735628491,0,1.77970243027311,1.0989032999072,0,5.60544326627578,0.913158720509496,0,0,1.28657779517981,0,3.83596703714813,0,0,0,2.0486217251274,3.45629830907046,0,0,0,0,0,0,0,0,0.098150233615243,1.21917924982269,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,21.4544159540086,3.71551252856727,0,0.490296643507811,0,0,0,0,0,0.281951753939561,0.45120521581504,0,0,0,0,4.3820183294791,0.458729283404541,0.143339583151451,0,0,0,6.34832208618481,0,0,0,0,0.327796715891087,0,1.32585478664576,0.534434810531121,8.54622565674058,0.50141507858475,0.454672189309436,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0.258355639344024,0.682821857254437,0.224263725161227,0,0,0.217716747896961,0.34223330108528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| |||
|short_description=p2@HPGD | |||
}} |
Latest revision as of 20:48, 16 September 2015
Short description: | p2@HPGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HPGD_5end |
Coexpression cluster: | C2787_chorionic_Mast_small_acute_chronic_colon_testicular |
Association with transcript: | 0bp_to_ENST00000508330, ENST00000541923, NM_000860, NM_001145816, uc003itu.2, uc003itv.2, uc003itw.2, uc003itx.2, uc010irp.2, uc010irq.2, uc011ckf.1, uc011ckg.1_5end |
EntrezGene: | HPGD |
HGNC: | 5154 |
UniProt: | E9PD69B4DU74P15428B4DV57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.85e-15 | 5 |
basophil mast progenitor cell | 6.85e-15 | 5 |
chorionic membrane mesenchymal stem cell | 2.04e-09 | 3 |
endocrine cell | 4.96e-08 | 9 |
embryonic stem cell | 9.82e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-10 | 17 |
gastrointestinal system | 3.67e-10 | 25 |
egg chorion | 2.04e-09 | 3 |
chorion | 8.72e-07 | 7 |