FFCP PHASE1:Hg19::chr20:48807351..48807384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1051 | |EntrezGene=1051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |HGNC=1834 | ||
|TSSclassifier=strong | |||
|UniProt=P17676 | |UniProt=P17676 | ||
|association_with_transcript=0bp_to_ENST00000303004,uc002xvh.2,uc002xvi.1_5end | |association_with_transcript=0bp_to_ENST00000303004,uc002xvh.2,uc002xvi.1_5end | ||
|cluster_id=chr20:48807351..48807384,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CEBPB_5end | |description=CAGE_peak_1_at_CEBPB_5end | ||
|id=chr20:48807351..48807384,+ | |id=chr20:48807351..48807384,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.97e-27!42;CL:0000766!7.63e-27!76;CL:0000860!1.13e-26!45;CL:0002194!2.05e-24!63;CL:0000576!2.05e-24!63;CL:0000040!2.05e-24!63;CL:0000559!2.05e-24!63;CL:0002009!1.94e-22!65;CL:0000839!3.65e-21!70;CL:0000557!1.05e-19!71;CL:0002320!1.68e-08!365;CL:0000134!1.79e-07!358;CL:0000136!3.21e-07!15;CL:0000063!3.23e-07!578;CL:0000763!9.03e-07!112;CL:0000049!9.03e-07!112;CL:0000548!9.24e-07!679;CL:0000004!9.24e-07!679;CL:0000255!9.24e-07!679 | |ontology_enrichment_celltype=CL:0002057!3.97e-27!42;CL:0000766!7.63e-27!76;CL:0000860!1.13e-26!45;CL:0002194!2.05e-24!63;CL:0000576!2.05e-24!63;CL:0000040!2.05e-24!63;CL:0000559!2.05e-24!63;CL:0002009!1.94e-22!65;CL:0000839!3.65e-21!70;CL:0000557!1.05e-19!71;CL:0002320!1.68e-08!365;CL:0000134!1.79e-07!358;CL:0000136!3.21e-07!15;CL:0000063!3.23e-07!578;CL:0000763!9.03e-07!112;CL:0000049!9.03e-07!112;CL:0000548!9.24e-07!679;CL:0000004!9.24e-07!679;CL:0000255!9.24e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-20;33!CL:0002057;2.55e-20;33!CL:0000473;2.95e-19;39!CL:0000234;2.95e-19;39!CL:0000576;1.06e-15;48!CL:0000766;4.47e-13;69!CL:0000136;3.45e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.86e-30,48;CL:0000234,9.86e-30,48;CL:0000766,2.21e-27,72;CL:0000860,3.97e-27,42;CL:0002057,3.97e-27,42;CL:0002194,4.53e-25,59;CL:0000576,4.53e-25,59;CL:0000040,4.53e-25,59;CL:0000559,4.53e-25,59;CL:0002009,5.67e-23,61;CL:0000839,1.41e-21,66;CL:0000557,4.74e-20,67;CL:0002320,1.76e-08,361;CL:0000134,1.87e-07,354;CL:0000136,3.21e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.17e-20!102;UBERON:0003061!2.17e-20!102;UBERON:0002193!1.13e-18!112;UBERON:0002371!1.40e-18!80;UBERON:0000926!9.79e-18!448;UBERON:0004120!9.79e-18!448;UBERON:0006603!9.79e-18!448;UBERON:0002405!4.45e-17!115;UBERON:0001474!9.69e-17!86;UBERON:0004765!2.67e-15!101;UBERON:0001434!2.67e-15!101;UBERON:0002204!1.95e-12!167;UBERON:0000468!1.66e-11!659;UBERON:0000062!1.98e-09!511;UBERON:0000467!3.26e-09!625;UBERON:0000480!6.53e-09!626;UBERON:0000923!7.78e-09!604;UBERON:0005291!7.78e-09!604;UBERON:0006598!7.78e-09!604;UBERON:0002532!7.78e-09!604;UBERON:0002050!1.08e-08!605;UBERON:0005423!1.08e-08!605;UBERON:0003081!4.86e-08!216;UBERON:0002384!8.40e-08!375;UBERON:0000922!1.48e-07!612 | |ontology_enrichment_uberon=UBERON:0002390!2.17e-20!102;UBERON:0003061!2.17e-20!102;UBERON:0002193!1.13e-18!112;UBERON:0002371!1.40e-18!80;UBERON:0000926!9.79e-18!448;UBERON:0004120!9.79e-18!448;UBERON:0006603!9.79e-18!448;UBERON:0002405!4.45e-17!115;UBERON:0001474!9.69e-17!86;UBERON:0004765!2.67e-15!101;UBERON:0001434!2.67e-15!101;UBERON:0002204!1.95e-12!167;UBERON:0000468!1.66e-11!659;UBERON:0000062!1.98e-09!511;UBERON:0000467!3.26e-09!625;UBERON:0000480!6.53e-09!626;UBERON:0000923!7.78e-09!604;UBERON:0005291!7.78e-09!604;UBERON:0006598!7.78e-09!604;UBERON:0002532!7.78e-09!604;UBERON:0002050!1.08e-08!605;UBERON:0005423!1.08e-08!605;UBERON:0003081!4.86e-08!216;UBERON:0002384!8.40e-08!375;UBERON:0000922!1.48e-07!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.61e-20,98;UBERON:0003061,1.61e-20,98;UBERON:0002371,8.33e-19,76;UBERON:0002193,1.01e-18,108;UBERON:0004765,3.34e-17,90;UBERON:0001474,7.13e-17,82;UBERON:0001434,6.02e-16,100;UBERON:0002405,5.76e-15,93;UBERON:0000926,3.38e-13,315;UBERON:0004120,3.38e-13,315;UBERON:0006603,3.38e-13,315;UBERON:0002204,4.13e-13,167;UBERON:0000923,3.46e-08,560;UBERON:0010316,3.46e-08,560;UBERON:0005291,3.46e-08,560;UBERON:0006598,3.46e-08,560;UBERON:0010317,3.46e-08,560;UBERON:0002532,3.46e-08,560;UBERON:0003081,5.44e-08,203;UBERON:0002050,6.47e-08,564;UBERON:0002384,8.88e-08,371;UBERON:0005423,2.59e-07,581 | |||
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51972,11.5404657229164 | ||
|short_description=p1@CEBPB | |short_description=p1@CEBPB | ||
}} | }} |
Latest revision as of 20:48, 16 September 2015
Short description: | p1@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEBPB_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000303004, uc002xvh.2, uc002xvi.1_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | P17676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.86e-30 | 48 |
phagocyte | 9.86e-30 | 48 |
myeloid leukocyte | 2.21e-27 | 72 |
classical monocyte | 3.97e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.97e-27 | 42 |
monopoietic cell | 4.53e-25 | 59 |
monocyte | 4.53e-25 | 59 |
monoblast | 4.53e-25 | 59 |
promonocyte | 4.53e-25 | 59 |
macrophage dendritic cell progenitor | 5.67e-23 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-21 | 66 |
granulocyte monocyte progenitor cell | 4.74e-20 | 67 |
connective tissue cell | 1.76e-08 | 361 |
mesenchymal cell | 1.87e-07 | 354 |
fat cell | 3.21e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.61e-20 | 98 |
blood island | 1.61e-20 | 98 |
bone marrow | 8.33e-19 | 76 |
hemolymphoid system | 1.01e-18 | 108 |
skeletal element | 3.34e-17 | 90 |
bone element | 7.13e-17 | 82 |
skeletal system | 6.02e-16 | 100 |
immune system | 5.76e-15 | 93 |
mesoderm | 3.38e-13 | 315 |
mesoderm-derived structure | 3.38e-13 | 315 |
presumptive mesoderm | 3.38e-13 | 315 |
musculoskeletal system | 4.13e-13 | 167 |
germ layer | 3.46e-08 | 560 |
germ layer / neural crest | 3.46e-08 | 560 |
embryonic tissue | 3.46e-08 | 560 |
presumptive structure | 3.46e-08 | 560 |
germ layer / neural crest derived structure | 3.46e-08 | 560 |
epiblast (generic) | 3.46e-08 | 560 |
lateral plate mesoderm | 5.44e-08 | 203 |
embryonic structure | 6.47e-08 | 564 |
connective tissue | 8.88e-08 | 371 |
developing anatomical structure | 2.59e-07 | 581 |