FFCP PHASE1:Hg19::chr19:19976714..19976729,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:19976714..19976729,+
|short_description=p3@ZNF253
|description=CAGE_peak_3_at_ZNF253_5end
|association_with_transcript=0bp_to_ENST00000355650,NM_021047,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56242 | |EntrezGene=56242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13497 | |HGNC=13497 | ||
|TSSclassifier=strong | |||
|UniProt=O75346 | |UniProt=O75346 | ||
|association_with_transcript=0bp_to_ENST00000355650,NM_021047,uc002noj.2,uc002nok.2,uc002nol.2_5end | |||
|cluster_id=chr19:19976714..19976729,+ | |||
|description=CAGE_peak_3_at_ZNF253_5end | |||
|id=chr19:19976714..19976729,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.03e-07!53;CL:0000051!2.03e-07!53;CL:0000838!3.32e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.11e-08,53;CL:0000051,1.11e-08,53;CL:0000838,1.99e-08,52;CL:0000047,3.67e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.69e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.99e-07,51;DOID:0060083,3.99e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-20!115;UBERON:0001017!1.06e-18!82;UBERON:0000073!1.24e-18!94;UBERON:0001016!1.24e-18!94;UBERON:0005743!2.44e-18!86;UBERON:0001049!1.09e-16!57;UBERON:0005068!1.09e-16!57;UBERON:0006241!1.09e-16!57;UBERON:0007135!1.09e-16!57;UBERON:0003080!1.58e-13!42;UBERON:0002616!1.89e-13!59;UBERON:0000955!1.95e-13!69;UBERON:0006238!1.95e-13!69;UBERON:0002780!4.10e-13!41;UBERON:0001890!4.10e-13!41;UBERON:0006240!4.10e-13!41;UBERON:0002346!1.40e-11!90;UBERON:0003075!2.54e-11!86;UBERON:0007284!2.54e-11!86;UBERON:0000924!4.64e-10!173;UBERON:0006601!4.64e-10!173;UBERON:0002020!7.64e-10!34;UBERON:0003528!7.64e-10!34;UBERON:0004121!9.44e-10!169;UBERON:0001893!1.52e-09!34;UBERON:0002791!1.67e-09!33;UBERON:0001869!1.22e-08!32;UBERON:0003056!4.94e-08!61;UBERON:0000153!1.09e-07!129;UBERON:0007811!1.09e-07!129;UBERON:0000956!6.69e-07!25;UBERON:0000203!6.69e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.23e-11;41!UBERON:0001890;2.23e-11;41!UBERON:0000073;1.68e-10;53!UBERON:0002616;1.68e-10;53!UBERON:0002791;1.53e-09;32!UBERON:0003528;1.75e-09;34!UBERON:0002020;1.75e-09;34!UBERON:0001893;3.05e-09;34!UBERON:0001869;4.13e-09;32!UBERON:0001016;1.08e-07;83!UBERON:0000956;1.12e-07;25!UBERON:0000203;1.12e-07;25!UBERON:0001017;4.35e-07;75!UBERON:0001950;6.11e-07;20!UBERON:0002619;7.34e-07;22!UBERON:0000955;7.65e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.48e-21,114;UBERON:0001016,1.09e-20,89;UBERON:0001017,2.75e-20,81;UBERON:0001049,9.93e-19,56;UBERON:0005068,9.93e-19,56;UBERON:0006241,9.93e-19,56;UBERON:0007135,9.93e-19,56;UBERON:0000073,3.89e-17,53;UBERON:0002616,3.89e-17,53;UBERON:0002780,3.21e-15,41;UBERON:0001890,3.21e-15,41;UBERON:0003080,3.21e-15,41;UBERON:0006240,3.21e-15,41;UBERON:0000955,3.02e-14,68;UBERON:0006238,3.02e-14,68;UBERON:0003075,3.05e-12,82;UBERON:0007284,3.05e-12,82;UBERON:0002346,3.14e-12,86;UBERON:0003528,2.20e-11,34;UBERON:0002020,2.20e-11,34;UBERON:0001893,4.95e-11,34;UBERON:0002791,1.46e-10,32;UBERON:0001869,5.70e-10,32;UBERON:0011216,2.47e-09,223;UBERON:0010371,3.27e-09,104;UBERON:0004121,5.49e-09,171;UBERON:0000924,5.49e-09,171;UBERON:0006601,5.49e-09,171;UBERON:0003056,5.51e-09,61;UBERON:0000956,6.14e-08,25;UBERON:0000203,6.14e-08,25;UBERON:0001950,2.31e-07,20;UBERON:0002619,3.03e-07,22 | |||
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| ||
|short_description=p3@ZNF253 | |||
}} | }} |
Latest revision as of 20:47, 16 September 2015
Short description: | p3@ZNF253 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF253_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355650, NM_021047, uc002noj.2, uc002nok.2, uc002nol.2_5end |
EntrezGene: | ZNF253 |
HGNC: | 13497 |
UniProt: | O75346 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.11e-08 | 53 |
common lymphoid progenitor | 1.11e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.99e-08 | 52 |
neuronal stem cell | 3.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.48e-21 | 114 |
nervous system | 1.09e-20 | 89 |
central nervous system | 2.75e-20 | 81 |
neural tube | 9.93e-19 | 56 |
neural rod | 9.93e-19 | 56 |
future spinal cord | 9.93e-19 | 56 |
neural keel | 9.93e-19 | 56 |
regional part of nervous system | 3.89e-17 | 53 |
regional part of brain | 3.89e-17 | 53 |
regional part of forebrain | 3.21e-15 | 41 |
forebrain | 3.21e-15 | 41 |
anterior neural tube | 3.21e-15 | 41 |
future forebrain | 3.21e-15 | 41 |
brain | 3.02e-14 | 68 |
future brain | 3.02e-14 | 68 |
neural plate | 3.05e-12 | 82 |
presumptive neural plate | 3.05e-12 | 82 |
neurectoderm | 3.14e-12 | 86 |
brain grey matter | 2.20e-11 | 34 |
gray matter | 2.20e-11 | 34 |
telencephalon | 4.95e-11 | 34 |
regional part of telencephalon | 1.46e-10 | 32 |
cerebral hemisphere | 5.70e-10 | 32 |
organ system subdivision | 2.47e-09 | 223 |
ecto-epithelium | 3.27e-09 | 104 |
ectoderm-derived structure | 5.49e-09 | 171 |
ectoderm | 5.49e-09 | 171 |
presumptive ectoderm | 5.49e-09 | 171 |
pre-chordal neural plate | 5.51e-09 | 61 |
cerebral cortex | 6.14e-08 | 25 |
pallium | 6.14e-08 | 25 |
neocortex | 2.31e-07 | 20 |
regional part of cerebral cortex | 3.03e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.99e-07 | 51 |
immune system cancer | 3.99e-07 | 51 |