FFCP PHASE1:Hg19::chr19:19932586..19932598,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:19932586..19932598,- to FFCP PHASE1:Hg19::chr19:19932586..19932598,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=440515 | |EntrezGene=440515 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23780 | |HGNC=23780 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JVG8 | |UniProt=Q5JVG8 | ||
|association_with_transcript=-26bp_to_ENST00000443905,ENST00000450683,ENST00000540806,NM_001099269,NM_001145404,uc002nog.2,uc002noh.3,uc010eci.2,uc010ecj.1_5end | |||
|cluster_id=chr19:19932586..19932598,- | |||
|description=CAGE_peak_2_at_ZNF506_5end | |||
|id=chr19:19932586..19932598,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.96e-17!86;UBERON:0000073!6.54e-16!94;UBERON:0001016!6.54e-16!94;UBERON:0001049!1.19e-15!57;UBERON:0005068!1.19e-15!57;UBERON:0006241!1.19e-15!57;UBERON:0007135!1.19e-15!57;UBERON:0001017!1.52e-15!82;UBERON:0003075!1.40e-14!86;UBERON:0007284!1.40e-14!86;UBERON:0002616!3.75e-14!59;UBERON:0002346!4.35e-14!90;UBERON:0000955!1.55e-13!69;UBERON:0006238!1.55e-13!69;UBERON:0000153!3.74e-13!129;UBERON:0007811!3.74e-13!129;UBERON:0007023!3.83e-13!115;UBERON:0003056!1.91e-12!61;UBERON:0003080!7.59e-12!42;UBERON:0002780!1.01e-11!41;UBERON:0001890!1.01e-11!41;UBERON:0006240!1.01e-11!41;UBERON:0000033!1.41e-11!123;UBERON:0001893!1.00e-09!34;UBERON:0004121!1.11e-09!169;UBERON:0000924!1.51e-09!173;UBERON:0006601!1.51e-09!173;UBERON:0002791!2.40e-09!33;UBERON:0001869!7.65e-09!32;UBERON:0002020!1.07e-08!34;UBERON:0003528!1.07e-08!34;UBERON:0000956!7.16e-07!25;UBERON:0000203!7.16e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.05e-09;53!UBERON:0002616;8.05e-09;53!UBERON:0002780;1.47e-08;41!UBERON:0001890;1.47e-08;41!UBERON:0001893;2.39e-08;34!UBERON:0002791;1.04e-07;32!UBERON:0001869;1.04e-07;32!UBERON:0003528;7.08e-07;34!UBERON:0002020;7.08e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.53e-16,56;UBERON:0005068,4.53e-16,56;UBERON:0006241,4.53e-16,56;UBERON:0007135,4.53e-16,56;UBERON:0003075,5.25e-16,82;UBERON:0007284,5.25e-16,82;UBERON:0002346,3.05e-15,86;UBERON:0001017,7.31e-15,81;UBERON:0000073,9.70e-15,53;UBERON:0002616,9.70e-15,53;UBERON:0003056,3.11e-14,61;UBERON:0001016,6.75e-14,89;UBERON:0000955,2.36e-13,68;UBERON:0006238,2.36e-13,68;UBERON:0007023,3.93e-13,114;UBERON:0002780,5.30e-12,41;UBERON:0001890,5.30e-12,41;UBERON:0003080,5.30e-12,41;UBERON:0006240,5.30e-12,41;UBERON:0010371,1.38e-11,104;UBERON:0001893,8.62e-10,34;UBERON:0004121,8.26e-09,171;UBERON:0000924,8.26e-09,171;UBERON:0006601,8.26e-09,171;UBERON:0001869,8.47e-09,32;UBERON:0010314,8.88e-09,132;UBERON:0002791,9.57e-09,32;UBERON:0003528,2.27e-08,34;UBERON:0002020,2.27e-08,34 | |||
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| ||
|short_description=p2@ZNF506 | |||
}} | }} |
Latest revision as of 20:44, 16 September 2015
Short description: | p2@ZNF506 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF506_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000443905, ENST00000450683, ENST00000540806, NM_001099269, NM_001145404, uc002nog.2, uc002noh.3, uc010eci.2, uc010ecj.1_5end |
EntrezGene: | ZNF506 |
HGNC: | 23780 |
UniProt: | Q5JVG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.53e-16 | 56 |
neural rod | 4.53e-16 | 56 |
future spinal cord | 4.53e-16 | 56 |
neural keel | 4.53e-16 | 56 |
neural plate | 5.25e-16 | 82 |
presumptive neural plate | 5.25e-16 | 82 |
neurectoderm | 3.05e-15 | 86 |
central nervous system | 7.31e-15 | 81 |
regional part of nervous system | 9.70e-15 | 53 |
regional part of brain | 9.70e-15 | 53 |
pre-chordal neural plate | 3.11e-14 | 61 |
nervous system | 6.75e-14 | 89 |
brain | 2.36e-13 | 68 |
future brain | 2.36e-13 | 68 |
adult organism | 3.93e-13 | 114 |
regional part of forebrain | 5.30e-12 | 41 |
forebrain | 5.30e-12 | 41 |
anterior neural tube | 5.30e-12 | 41 |
future forebrain | 5.30e-12 | 41 |
ecto-epithelium | 1.38e-11 | 104 |
telencephalon | 8.62e-10 | 34 |
ectoderm-derived structure | 8.26e-09 | 171 |
ectoderm | 8.26e-09 | 171 |
presumptive ectoderm | 8.26e-09 | 171 |
cerebral hemisphere | 8.47e-09 | 32 |
structure with developmental contribution from neural crest | 8.88e-09 | 132 |
regional part of telencephalon | 9.57e-09 | 32 |
brain grey matter | 2.27e-08 | 34 |
gray matter | 2.27e-08 | 34 |