FFCP PHASE1:Hg19::chr19:19932513..19932569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440515 | |EntrezGene=440515 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23780 | |HGNC=23780 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JVG8,F5H490 | |UniProt=Q5JVG8,F5H490 | ||
|association_with_transcript=0bp_to_ENST00000443905,ENST00000450683,ENST00000540806,ENST00000545006,NM_001099269,NM_001145404,uc002nog.2,uc002noh.3,uc010eci.2,uc010ecj.1_5end | |association_with_transcript=0bp_to_ENST00000443905,ENST00000450683,ENST00000540806,ENST00000545006,NM_001099269,NM_001145404,uc002nog.2,uc002noh.3,uc010eci.2,uc010ecj.1_5end | ||
|cluster_id=chr19:19932513..19932569,- | |||
|coexpression_cluster_id=C1815 | |coexpression_cluster_id=C1815 | ||
|description=CAGE_peak_1_at_ZNF506_5end | |description=CAGE_peak_1_at_ZNF506_5end | ||
|id=chr19:19932513..19932569,- | |id=chr19:19932513..19932569,- | ||
|ontology_enrichment_celltype=CL:0000838!5.07e-11!52;CL:0000542!2.91e-10!53;CL:0000051!2.91e-10!53;CL:0000738!1.93e-09!140;CL:0000791!6.65e-09!18;CL:0000789!6.65e-09!18;CL:0002420!6.65e-09!18;CL:0002419!6.65e-09!18;CL:0000790!6.65e-09!18;CL:0000236!1.92e-07!14;CL:0000625!2.93e-07!11 | |ontology_enrichment_celltype=CL:0000838!5.07e-11!52;CL:0000542!2.91e-10!53;CL:0000051!2.91e-10!53;CL:0000738!1.93e-09!140;CL:0000791!6.65e-09!18;CL:0000789!6.65e-09!18;CL:0002420!6.65e-09!18;CL:0002419!6.65e-09!18;CL:0000790!6.65e-09!18;CL:0000236!1.92e-07!14;CL:0000625!2.93e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.62e-09;18!CL:0000789;6.62e-09;18!CL:0002419;6.62e-09;18!CL:0000236;9.86e-08;13!CL:0000625;2.94e-07;11!CL:0000542;5.74e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.13e-11,52;CL:0000738,6.79e-11,136;CL:0000542,3.79e-10,53;CL:0000051,3.79e-10,53;CL:0000791,6.62e-09,18;CL:0000789,6.62e-09,18;CL:0002420,6.62e-09,18;CL:0002419,6.62e-09,18;CL:0000790,6.62e-09,18;CL:0002031,1.67e-07,120;CL:0000236,1.91e-07,14;CL:0002087,2.30e-07,115;CL:0000625,2.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.62e-09;18!CL:0000051;5.74e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-32!115;UBERON:0001049!8.50e-23!57;UBERON:0005068!8.50e-23!57;UBERON:0006241!8.50e-23!57;UBERON:0007135!8.50e-23!57;UBERON:0000073!2.94e-21!94;UBERON:0001016!2.94e-21!94;UBERON:0005743!5.19e-21!86;UBERON:0001017!1.78e-20!82;UBERON:0002616!8.67e-20!59;UBERON:0003080!1.13e-19!42;UBERON:0002780!2.08e-19!41;UBERON:0001890!2.08e-19!41;UBERON:0006240!2.08e-19!41;UBERON:0002346!4.77e-19!90;UBERON:0003075!2.29e-18!86;UBERON:0007284!2.29e-18!86;UBERON:0000955!2.89e-18!69;UBERON:0006238!2.89e-18!69;UBERON:0003056!4.65e-16!61;UBERON:0001893!1.69e-15!34;UBERON:0002020!1.98e-15!34;UBERON:0003528!1.98e-15!34;UBERON:0002791!3.58e-15!33;UBERON:0001869!1.88e-14!32;UBERON:0000153!1.92e-12!129;UBERON:0007811!1.92e-12!129;UBERON:0000924!1.01e-11!173;UBERON:0006601!1.01e-11!173;UBERON:0000033!2.79e-11!123;UBERON:0002619!3.61e-11!22;UBERON:0004121!4.12e-11!169;UBERON:0000956!8.89e-11!25;UBERON:0000203!8.89e-11!25;UBERON:0001950!2.96e-10!20;UBERON:0000178!3.58e-07!15;UBERON:0000179!3.58e-07!15;UBERON:0000463!3.58e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!2.57e-32!115;UBERON:0001049!8.50e-23!57;UBERON:0005068!8.50e-23!57;UBERON:0006241!8.50e-23!57;UBERON:0007135!8.50e-23!57;UBERON:0000073!2.94e-21!94;UBERON:0001016!2.94e-21!94;UBERON:0005743!5.19e-21!86;UBERON:0001017!1.78e-20!82;UBERON:0002616!8.67e-20!59;UBERON:0003080!1.13e-19!42;UBERON:0002780!2.08e-19!41;UBERON:0001890!2.08e-19!41;UBERON:0006240!2.08e-19!41;UBERON:0002346!4.77e-19!90;UBERON:0003075!2.29e-18!86;UBERON:0007284!2.29e-18!86;UBERON:0000955!2.89e-18!69;UBERON:0006238!2.89e-18!69;UBERON:0003056!4.65e-16!61;UBERON:0001893!1.69e-15!34;UBERON:0002020!1.98e-15!34;UBERON:0003528!1.98e-15!34;UBERON:0002791!3.58e-15!33;UBERON:0001869!1.88e-14!32;UBERON:0000153!1.92e-12!129;UBERON:0007811!1.92e-12!129;UBERON:0000924!1.01e-11!173;UBERON:0006601!1.01e-11!173;UBERON:0000033!2.79e-11!123;UBERON:0002619!3.61e-11!22;UBERON:0004121!4.12e-11!169;UBERON:0000956!8.89e-11!25;UBERON:0000203!8.89e-11!25;UBERON:0001950!2.96e-10!20;UBERON:0000178!3.58e-07!15;UBERON:0000179!3.58e-07!15;UBERON:0000463!3.58e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.61e-14;41!UBERON:0001890;2.61e-14;41!UBERON:0002791;2.05e-13;32!UBERON:0003528;2.83e-13;34!UBERON:0002020;2.83e-13;34!UBERON:0001893;3.05e-13;34!UBERON:0001869;3.49e-13;32!UBERON:0000073;1.01e-12;53!UBERON:0002616;1.01e-12;53!UBERON:0002619;3.39e-11;22!UBERON:0000956;7.96e-11;25!UBERON:0000203;7.96e-11;25!UBERON:0001950;2.83e-10;20!UBERON:0007023;1.87e-09;114!UBERON:0001017;3.42e-09;75!UBERON:0000955;6.20e-09;68!UBERON:0001016;1.00e-08;83!UBERON:0000178;3.72e-07;15!UBERON:0000179;3.72e-07;15!UBERON:0000463;3.72e-07;15 | |||
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| ||
|short_description=p1@ZNF506 | |short_description=p1@ZNF506 | ||
}} | }} |
Latest revision as of 20:44, 16 September 2015
Short description: | p1@ZNF506 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF506_5end |
Coexpression cluster: | C1815_CD4_cerebellum_cord_CD19_pineal_parietal_pituitary |
Association with transcript: | 0bp_to_ENST00000443905, ENST00000450683, ENST00000540806, ENST00000545006, NM_001099269, NM_001145404, uc002nog.2, uc002noh.3, uc010eci.2, uc010ecj.1_5end |
EntrezGene: | ZNF506 |
HGNC: | 23780 |
UniProt: | Q5JVG8F5H490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.13e-11 | 52 |
leukocyte | 6.79e-11 | 136 |
lymphocyte | 3.79e-10 | 53 |
common lymphoid progenitor | 3.79e-10 | 53 |
mature alpha-beta T cell | 6.62e-09 | 18 |
alpha-beta T cell | 6.62e-09 | 18 |
immature T cell | 6.62e-09 | 18 |
mature T cell | 6.62e-09 | 18 |
immature alpha-beta T cell | 6.62e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 1.67e-07 | 120 |
B cell | 1.91e-07 | 14 |
nongranular leukocyte | 2.30e-07 | 115 |
CD8-positive, alpha-beta T cell | 2.92e-07 | 11 |