FFCP PHASE1:Hg19::chr2:29341068..29341087,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79745 | |EntrezGene=79745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |HGNC=26108 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW06 | |UniProt=E7EW06 | ||
|association_with_transcript=7bp_to_ENST00000449202_5end | |association_with_transcript=7bp_to_ENST00000449202_5end | ||
|cluster_id=chr2:29341068..29341087,+ | |||
|coexpression_cluster_id=C4218 | |coexpression_cluster_id=C4218 | ||
|description=CAGE_peak_15_at_CLIP4_5end | |description=CAGE_peak_15_at_CLIP4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!1.20e-19!254;CL:0000077!2.09e-10!19;CL:0002149!1.02e-08!6;CL:0002255!1.02e-08!6;CL:0000223!1.28e-08!59;CL:0000076!3.38e-08!62;CL:0002076!1.48e-07!43;CL:0002586!3.75e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.20e-19!254;CL:0000077!2.09e-10!19;CL:0002149!1.02e-08!6;CL:0002255!1.02e-08!6;CL:0000223!1.28e-08!59;CL:0000076!3.38e-08!62;CL:0002076!1.48e-07!43;CL:0002586!3.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002573;1.94e-18;2!CL:0000313;1.84e-14;1!CL:0000159;7.03e-08;2!CL:0000243;1.57e-07;15!CL:0000125;1.57e-07;15!CL:0000095;8.63e-07;17 | |ontology_enrichment_celltype_v019=CL:0002573;1.94e-18;2!CL:0000313;1.84e-14;1!CL:0000159;7.03e-08;2!CL:0000243;1.57e-07;15!CL:0000125;1.57e-07;15!CL:0000095;8.63e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.62e-18,2;CL:0000313,1.07e-14,1;CL:0000159,5.37e-08,2;CL:0000243,1.64e-07,15;CL:0000125,1.64e-07,15;CL:0000030,1.64e-07,15;CL:0000339,1.64e-07,15;CL:0000095,8.98e-07,17;CL:0000123,8.98e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;1.57e-07;15 | |ontology_enrichment_development_v019=CL:0000339;1.57e-07;15 | ||
|ontology_enrichment_disease=DOID:305!1.30e-19!106;DOID:0050687!6.48e-17!143;DOID:14566!1.29e-12!239;DOID:162!1.15e-11!235;DOID:299!1.86e-09!25;DOID:3001!1.02e-08!6 | |ontology_enrichment_disease=DOID:305!1.30e-19!106;DOID:0050687!6.48e-17!143;DOID:14566!1.29e-12!239;DOID:162!1.15e-11!235;DOID:299!1.86e-09!25;DOID:3001!1.02e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.84e-14;1!DOID:299;1.00e-08;25!DOID:4468;4.53e-08;2!DOID:4929;7.03e-08;2 | |ontology_enrichment_disease_v019=DOID:2152;1.84e-14;1!DOID:299;1.00e-08;25!DOID:4468;4.53e-08;2!DOID:4929;7.03e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.07e-14,1;DOID:299,9.33e-09,25;DOID:4468,4.38e-08,2;DOID:14566,8.03e-08,239;DOID:4929,8.60e-08,2;DOID:305,2.76e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.91e-09!7;UBERON:0001173!1.91e-09!7;UBERON:0004912!1.91e-09!7;UBERON:0002394!3.25e-08!4;UBERON:0003928!3.25e-08!4;UBERON:0005911!9.82e-08!82;UBERON:0003929!1.82e-07!54;UBERON:0001781!3.75e-07!3;UBERON:0001782!3.75e-07!3;UBERON:0005424!3.75e-07!3;UBERON:0000966!8.93e-07!5;UBERON:0005388!8.93e-07!5;UBERON:0001802!8.93e-07!5 | |ontology_enrichment_uberon=UBERON:0002294!1.91e-09!7;UBERON:0001173!1.91e-09!7;UBERON:0004912!1.91e-09!7;UBERON:0002394!3.25e-08!4;UBERON:0003928!3.25e-08!4;UBERON:0005911!9.82e-08!82;UBERON:0003929!1.82e-07!54;UBERON:0001781!3.75e-07!3;UBERON:0001782!3.75e-07!3;UBERON:0005424!3.75e-07!3;UBERON:0000966!8.93e-07!5;UBERON:0005388!8.93e-07!5;UBERON:0001802!8.93e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.84e-14;1!UBERON:0004913;1.84e-14;1!UBERON:0003703;1.84e-14;1!UBERON:0001174;1.84e-14;1!UBERON:0004914;1.84e-14;1!UBERON:0004909;7.03e-08;2!UBERON:0000010;9.37e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0004911;1.84e-14;1!UBERON:0004913;1.84e-14;1!UBERON:0003703;1.84e-14;1!UBERON:0001174;1.84e-14;1!UBERON:0004914;1.84e-14;1!UBERON:0004909;7.03e-08;2!UBERON:0000010;9.37e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.07e-14,1;UBERON:0004913,2.75e-14,1;UBERON:0003703,2.75e-14,1;UBERON:0001174,2.75e-14,1;UBERON:0004914,2.75e-14,1;UBERON:0004909,5.37e-08,2;UBERON:0000010,8.84e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,1.02268682502155,0,0,0.359473404589307,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3209787098083,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0,0,1.42304773014896,0.277349346026277,0.347119476670262,0.0979923974143777,0.34823682632161,0,0.343972064943233,0,0,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.240476460754601,0,0,0.288180834308212,0,0,0.576219191952599,9.07043509627657,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,1.14681839138014,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.770479321629213,0.214441591374926,0.260994291965212,0,0,0,0,0.617602894321944,0,0.176689145945881,0.38582807654183,2.19625172848994,0,2.41801239211839,0.303859956177382,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0,0,0,0,0,0,0,0,0.49131575253029,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0.514464028312255,0,0.0657727735628491,0.590969204419841,0.222462803784138,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,1.53831600949735,1.10777426186905,0,0.68732060563215,0.93061915699296,0,1.90154234056247,0.196300467230486,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,2.16651690060754,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.162806537221949,5.12291260213034,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,1.02268682502155,0,0,0.359473404589307,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3209787098083,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0,0,1.42304773014896,0.277349346026277,0.347119476670262,0.0979923974143777,0.34823682632161,0,0.343972064943233,0,0,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0,0.195551382734803,0.240476460754601,0,0,0.288180834308212,0,0,0.576219191952599,9.07043509627657,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,1.14681839138014,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.770479321629213,0.214441591374926,0.260994291965212,0,0,0,0,0.617602894321944,0,0.176689145945881,0.38582807654183,2.19625172848994,0,2.41801239211839,0.303859956177382,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0,0,0,0,0,0,0,0,0.49131575253029,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0.514464028312255,0,0.0657727735628491,0.590969204419841,0.222462803784138,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,1.53831600949735,1.10777426186905,0,0.68732060563215,0.93061915699296,0,1.90154234056247,0.196300467230486,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,2.16651690060754,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.162806537221949,5.12291260213034,0,0,0,0,0,0,0,0 | ||
|short_description=p15@CLIP4 | |short_description=p15@CLIP4 | ||
}} | }} |
Latest revision as of 20:39, 16 September 2015
Short description: | p15@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CLIP4_5end |
Coexpression cluster: | C4218_giant_transitionalcell_clear_large_squamous_mesothelioma_serous |
Association with transcript: | 7bp_to_ENST00000449202_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | E7EW06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.62e-18 | 2 |
serous secreting cell | 1.07e-14 | 1 |
seromucus secreting cell | 5.37e-08 | 2 |
glial cell (sensu Vertebrata) | 1.64e-07 | 15 |
glial cell | 1.64e-07 | 15 |
glioblast | 1.64e-07 | 15 |
glioblast (sensu Vertebrata) | 1.64e-07 | 15 |
neuron associated cell | 8.98e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.98e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.07e-14 | 1 |
hepatopancreatic ampulla | 2.75e-14 | 1 |
extrahepatic bile duct | 2.75e-14 | 1 |
common bile duct | 2.75e-14 | 1 |
duodenal papilla | 2.75e-14 | 1 |
epithelium of gonad | 5.37e-08 | 2 |
peripheral nervous system | 8.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.07e-14 | 1 |
adenocarcinoma | 9.33e-09 | 25 |
clear cell adenocarcinoma | 4.38e-08 | 2 |
disease of cellular proliferation | 8.03e-08 | 239 |
tubular adenocarcinoma | 8.60e-08 | 2 |
carcinoma | 2.76e-07 | 106 |