FFCP PHASE1:Hg19::chr2:29341016..29341031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79745 | |EntrezGene=79745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |HGNC=26108 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW06 | |UniProt=E7EW06 | ||
|association_with_transcript=-29bp_to_ENST00000449202_5end | |association_with_transcript=-29bp_to_ENST00000449202_5end | ||
|cluster_id=chr2:29341016..29341031,+ | |||
|coexpression_cluster_id=C4218 | |coexpression_cluster_id=C4218 | ||
|description=CAGE_peak_17_at_CLIP4_5end | |description=CAGE_peak_17_at_CLIP4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!2.38e-26!254;CL:0002076!3.01e-11!43;CL:0000223!1.08e-09!59;CL:0000076!1.57e-08!62;CL:0000077!2.77e-07!19 | |ontology_enrichment_celltype=CL:0000066!2.38e-26!254;CL:0002076!3.01e-11!43;CL:0000223!1.08e-09!59;CL:0000076!1.57e-08!62;CL:0000077!2.77e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002581;5.37e-13;1!CL:0000313;5.37e-13;1!CL:0000159;3.92e-07;2!CL:0002262;3.92e-07;2!CL:1000398;3.92e-07;2!CL:0000076;7.48e-07;63 | |ontology_enrichment_celltype_v019=CL:0002581;5.37e-13;1!CL:0000313;5.37e-13;1!CL:0000159;3.92e-07;2!CL:0002262;3.92e-07;2!CL:1000398;3.92e-07;2!CL:0000076;7.48e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.23e-13,1;CL:0000313,9.73e-13,1;CL:0000076,4.59e-11,63;CL:0000066,1.76e-08,253;CL:0002262,3.70e-07,2;CL:1000398,3.70e-07,2;CL:0000159,5.28e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.91e-18!106;DOID:0050687!4.72e-16!143;DOID:14566!3.67e-12!239;DOID:162!1.98e-11!235;DOID:1749!7.33e-11!14;DOID:299!2.24e-08!25 | |ontology_enrichment_disease=DOID:305!2.91e-18!106;DOID:0050687!4.72e-16!143;DOID:14566!3.67e-12!239;DOID:162!1.98e-11!235;DOID:1749!7.33e-11!14;DOID:299!2.24e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.81e-14;14!DOID:2152;5.37e-13;1!DOID:1324;1.04e-07;15!DOID:4468;2.21e-07;2!DOID:0050615;2.94e-07;16 | |ontology_enrichment_disease_v019=DOID:1749;8.81e-14;14!DOID:2152;5.37e-13;1!DOID:1324;1.04e-07;15!DOID:4468;2.21e-07;2!DOID:0050615;2.94e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,6.12e-14,14;DOID:2152,9.73e-13,1;DOID:305,7.05e-10,106;DOID:0050687,1.54e-08,143;DOID:1324,1.12e-07,15;DOID:4468,2.28e-07,2;DOID:0050615,3.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.38e-11!11;UBERON:0000076!6.41e-07!8 | |ontology_enrichment_uberon=UBERON:0007625!6.38e-11!11;UBERON:0000076!6.41e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.37e-13;1!UBERON:0001281;3.92e-07;2!UBERON:0003497;3.92e-07;2!UBERON:0003909;3.92e-07;2!UBERON:0003835;3.92e-07;2!UBERON:0004909;3.92e-07;2!UBERON:0005406;3.92e-07;2!UBERON:0005911;5.37e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0004911;5.37e-13;1!UBERON:0001281;3.92e-07;2!UBERON:0003497;3.92e-07;2!UBERON:0003909;3.92e-07;2!UBERON:0003835;3.92e-07;2!UBERON:0004909;3.92e-07;2!UBERON:0005406;3.92e-07;2!UBERON:0005911;5.37e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.73e-13,1;UBERON:0005406,3.48e-07,2;UBERON:0001281,3.70e-07,2;UBERON:0003497,3.70e-07,2;UBERON:0003909,3.70e-07,2;UBERON:0003835,3.70e-07,2;UBERON:0004909,5.28e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.301586917234893,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0.40101294060657,0.736647911487171,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.382838137483752,0.30347334256665,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0,0,0,0.306806047506464,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16497096792041,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,1.323967823502,0.627865836814451,0,0,0.277349346026277,0.347119476670262,0.195984794828755,0.522355239482415,0,0.343972064943233,0.0967563312890851,0.146178634172371,0,0,0,0,0.274083849293502,0.596143835108969,0,0,0.400794101257669,0,0.19980960958213,0.288180834308212,0,0,1.58460277786965,3.23056592470125,0,0.543616824294456,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87872795979168,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0.260994291965212,0,0,0.489473409012935,0,0,0.219284049578707,0.176689145945881,1.15748422962549,1.52048196587765,0,1.0362910251936,0.303859956177382,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.620916591138472,0,0.342976018874837,0,0,0.590969204419841,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0.22910686854405,0.31020638566432,0,1.11855431797792,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.76447435857846,2.80844783412089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,1.28072815053259,0,0,0,0,0,0,0,0 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| ||
|short_description=p17@CLIP4 | |short_description=p17@CLIP4 | ||
}} | }} |
Latest revision as of 20:38, 16 September 2015
Short description: | p17@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CLIP4_5end |
Coexpression cluster: | C4218_giant_transitionalcell_clear_large_squamous_mesothelioma_serous |
Association with transcript: | -29bp_to_ENST00000449202_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | E7EW06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.23e-13 | 1 |
serous secreting cell | 9.73e-13 | 1 |
squamous epithelial cell | 4.59e-11 | 63 |
epithelial cell | 1.76e-08 | 253 |
endothelial cell of sinusoid | 3.70e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.70e-07 | 2 |
seromucus secreting cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.73e-13 | 1 |
perirenal fat | 3.48e-07 | 2 |
hepatic sinusoid | 3.70e-07 | 2 |
abdomen blood vessel | 3.70e-07 | 2 |
sinusoid | 3.70e-07 | 2 |
abdominal segment blood vessel | 3.70e-07 | 2 |
epithelium of gonad | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.12e-14 | 14 |
ovary epithelial cancer | 9.73e-13 | 1 |
carcinoma | 7.05e-10 | 106 |
cell type cancer | 1.54e-08 | 143 |
lung cancer | 1.12e-07 | 15 |
clear cell adenocarcinoma | 2.28e-07 | 2 |
respiratory system cancer | 3.14e-07 | 16 |