FFCP PHASE1:Hg19::chr19:19738972..19738983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9170 | |EntrezGene=9170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3168 | |HGNC=3168 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBW0 | |UniProt=Q9HBW0 | ||
|association_with_transcript=55bp_to_ENST00000407877,NM_004720,uc002nna.3,uc002nnb.3_5end | |association_with_transcript=55bp_to_ENST00000407877,NM_004720,uc002nna.3,uc002nnb.3_5end | ||
|cluster_id=chr19:19738972..19738983,- | |||
|description=CAGE_peak_4_at_LPAR2_5end | |description=CAGE_peak_4_at_LPAR2_5end | ||
|id=chr19:19738972..19738983,- | |id=chr19:19738972..19738983,- | ||
|ontology_enrichment_celltype=CL:0000791!6.67e-10!18;CL:0000789!6.67e-10!18;CL:0002420!6.67e-10!18;CL:0002419!6.67e-10!18;CL:0000790!6.67e-10!18;CL:0000039!3.56e-08!7;CL:0000586!3.56e-08!7;CL:0000084!5.27e-08!25;CL:0000827!5.27e-08!25;CL:0000624!6.87e-08!6;CL:0000838!3.43e-07!52;CL:0000542!6.53e-07!53;CL:0000051!6.53e-07!53 | |ontology_enrichment_celltype=CL:0000791!6.67e-10!18;CL:0000789!6.67e-10!18;CL:0002420!6.67e-10!18;CL:0002419!6.67e-10!18;CL:0000790!6.67e-10!18;CL:0000039!3.56e-08!7;CL:0000586!3.56e-08!7;CL:0000084!5.27e-08!25;CL:0000827!5.27e-08!25;CL:0000624!6.87e-08!6;CL:0000838!3.43e-07!52;CL:0000542!6.53e-07!53;CL:0000051!6.53e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.08e-23;6!CL:0000791;1.99e-19;18!CL:0000789;1.99e-19;18!CL:0002419;1.99e-19;18!CL:0000084;3.64e-17;25!CL:0000815;4.61e-12;2!CL:0000792;4.61e-12;2!CL:0002677;4.61e-12;2!CL:0000898;2.50e-08;3!CL:0000623;2.50e-08;3!CL:0000039;1.16e-07;7!CL:0000586;1.16e-07;7!CL:0000542;2.60e-07;53!CL:1001319;7.34e-07;1!CL:1000600;7.34e-07;1!CL:0002553;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.24e-23,6;CL:0000791,2.19e-19,18;CL:0000789,2.19e-19,18;CL:0002420,2.19e-19,18;CL:0002419,2.19e-19,18;CL:0000790,2.19e-19,18;CL:0000084,5.03e-17,25;CL:0000827,5.03e-17,25;CL:0000838,2.99e-13,52;CL:0000542,5.89e-13,53;CL:0000051,5.89e-13,53;CL:0000815,5.49e-12,2;CL:0000792,5.49e-12,2;CL:0002677,5.49e-12,2;CL:0000623,2.16e-08,3;CL:0000825,2.16e-08,3;CL:0000898,2.80e-08,3;CL:0000039,5.31e-08,7;CL:0000586,5.31e-08,7;CL:0002553,5.37e-07,1;CL:1001319,8.98e-07,1;CL:1000600,8.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.99e-19;18!CL:0000051;2.60e-07;53 | |||
|ontology_enrichment_disease=DOID:305!1.89e-07!106;DOID:0050687!1.96e-07!143;DOID:3095!2.85e-07!22;DOID:2994!2.85e-07!22 | |ontology_enrichment_disease=DOID:305!1.89e-07!106;DOID:0050687!1.96e-07!143;DOID:3095!2.85e-07!22;DOID:2994!2.85e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.11e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!5.11e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.34e-07;1!UBERON:0001256;7.34e-07;1!UBERON:0001259;7.34e-07;1!UBERON:0000473;9.33e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.73e-07,8;UBERON:0004645,8.98e-07,1;UBERON:0001256,8.98e-07,1;UBERON:0001259,8.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.164201178899891,0.314843125254717,0.393364276848904,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0.401088894940283,0.868043482863407,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,1.32171328579026,0,0,1.37696839079683,4.71612915298998,3.70082698199117,1.67186495390678,1.62961133316795,0,0,1.22551502573691,1.17842362989935,0.886135578334485,0.541607727530031,2.81800903396485,4.03183977435623,0.986627427622057,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.679856056185397,0.766440987203842,0,0,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0,2.01606743224732,4.01160293675261,2.89648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.860413786167011,0.853815942907168,0.662648841607426,0.929551542956147,0.518305275076852,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.658501712451753,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,0.431255149719035,1.54011643535698,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0.620304078368662,1.72571360654893,0.853820462427555,0.606255142892519,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,1.66215201785745,0,0,0,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0.19924798825107,0.552567831062295,0.503865495708552,0,0.246169610922139,0,0.629078458031288,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0.520855522170466,0.61221999997337,0.724999575434793,0.227586896570999,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0.359030577639089,0.869178975376065,0,0.549585560411174,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,1.27217764290547,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0,0.529536760149002,0.451961481561065,0,0,0,0.391102765469606,0.0801588202515337,0.426905989478705,0,0.72045208577053,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.962776056180637,1.24632101408756,0,0,0.121499113316049,0,0,0.104909176269996,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0.496166021811951,0,0.121792598380896,0.638341257770182,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0.383683113910955,0,0.314531883711793,0,0.509197589862076,0,0.123935764259002,0,0,0.552032215008773,1.60114149657094,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.490738592505128,0.471878893390961,0,0,0,0,0,0.150420656698515,0,0,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0.460935950223117,0,0.0679697329768317,0.131545547125698,0.118193840883968,0.111231401892069,0,0,0.560544326627578,0,0,0.47775168788705,0,0,0.23248285073625,0.173858272302579,0,0.207216164163037,0,0,0,0,0.0852134047591577,0.846774100381858,0.22910686854405,0,0,0,0.588901401691458,0.853425474875886,0,0,0,0,0.233939463462106,1.59160620129095,0,0,0.219881033490858,0.905777061400041,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0.375935671919414,0,0,0,0.352894871715692,0,0,0.458729283404541,0,0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| ||
|short_description=p4@LPAR2 | |short_description=p4@LPAR2 | ||
}} | }} |
Latest revision as of 20:26, 16 September 2015
Short description: | p4@LPAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LPAR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000407877, NM_004720, uc002nna.3, uc002nnb.3_5end |
EntrezGene: | LPAR2 |
HGNC: | 3168 |
UniProt: | Q9HBW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.24e-23 | 6 |
mature alpha-beta T cell | 2.19e-19 | 18 |
alpha-beta T cell | 2.19e-19 | 18 |
immature T cell | 2.19e-19 | 18 |
mature T cell | 2.19e-19 | 18 |
immature alpha-beta T cell | 2.19e-19 | 18 |
T cell | 5.03e-17 | 25 |
pro-T cell | 5.03e-17 | 25 |
lymphoid lineage restricted progenitor cell | 2.99e-13 | 52 |
lymphocyte | 5.89e-13 | 53 |
common lymphoid progenitor | 5.89e-13 | 53 |
regulatory T cell | 5.49e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.49e-12 | 2 |
naive regulatory T cell | 5.49e-12 | 2 |
natural killer cell | 2.16e-08 | 3 |
pro-NK cell | 2.16e-08 | 3 |
naive T cell | 2.80e-08 | 3 |
germ line cell | 5.31e-08 | 7 |
germ cell | 5.31e-08 | 7 |
lung fibroblast | 5.37e-07 | 1 |
bladder cell | 8.98e-07 | 1 |
lower urinary tract cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 4.73e-07 | 8 |
urinary bladder urothelium | 8.98e-07 | 1 |
wall of urinary bladder | 8.98e-07 | 1 |
mucosa of urinary bladder | 8.98e-07 | 1 |