FFCP PHASE1:Hg19::chr11:133938955..133938973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83700 | |EntrezGene=83700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15532 | |HGNC=15532 | ||
|TSSclassifier=strong | |||
|UniProt=B3KWG9 | |UniProt=B3KWG9 | ||
|association_with_transcript=0bp_to_ENST00000441717,ENST00000531698,ENST00000532252,ENST00000534549_5end | |association_with_transcript=0bp_to_ENST00000441717,ENST00000531698,ENST00000532252,ENST00000534549_5end | ||
|cluster_id=chr11:133938955..133938973,+ | |||
|description=CAGE_peak_1_at_JAM3_5end | |description=CAGE_peak_1_at_JAM3_5end | ||
|id=chr11:133938955..133938973,+ | |id=chr11:133938955..133938973,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.83e-17!180;CL:0000393!1.54e-10!60;CL:0000211!1.54e-10!60;CL:0000680!2.42e-10!57;CL:0000056!2.42e-10!57;CL:0000355!2.42e-10!57;CL:0000183!2.71e-10!59;CL:0000187!3.35e-10!54;CL:0000222!4.19e-09!119;CL:0000359!3.06e-08!32;CL:0000192!6.95e-08!42;CL:0000514!6.95e-08!42 | |ontology_enrichment_celltype=CL:0000055!2.83e-17!180;CL:0000393!1.54e-10!60;CL:0000211!1.54e-10!60;CL:0000680!2.42e-10!57;CL:0000056!2.42e-10!57;CL:0000355!2.42e-10!57;CL:0000183!2.71e-10!59;CL:0000187!3.35e-10!54;CL:0000222!4.19e-09!119;CL:0000359!3.06e-08!32;CL:0000192!6.95e-08!42;CL:0000514!6.95e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.51e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.17e-10,61;CL:0000211,2.17e-10,61;CL:0000680,3.47e-10,58;CL:0000056,3.47e-10,58;CL:0000355,3.47e-10,58;CL:0000187,4.89e-10,55;CL:0000222,2.07e-09,121;CL:0000359,2.67e-08,32;CL:0000192,1.04e-07,43;CL:0000514,1.04e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.03e-27!115;UBERON:0004535!1.82e-24!110;UBERON:0001009!2.09e-24!113;UBERON:0005743!3.07e-23!86;UBERON:0000073!5.66e-23!94;UBERON:0001016!5.66e-23!94;UBERON:0001017!9.01e-23!82;UBERON:0002346!2.20e-21!90;UBERON:0000025!3.29e-21!194;UBERON:0003075!4.90e-21!86;UBERON:0007284!4.90e-21!86;UBERON:0001049!1.96e-20!57;UBERON:0005068!1.96e-20!57;UBERON:0006241!1.96e-20!57;UBERON:0007135!1.96e-20!57;UBERON:0000955!7.78e-19!69;UBERON:0006238!7.78e-19!69;UBERON:0000119!1.18e-18!312;UBERON:0004111!1.55e-18!241;UBERON:0002616!1.91e-18!59;UBERON:0000483!4.32e-18!309;UBERON:0004872!2.70e-17!84;UBERON:0001981!4.63e-17!60;UBERON:0007500!4.63e-17!60;UBERON:0004537!4.63e-17!60;UBERON:0006965!4.63e-17!60;UBERON:0002780!7.34e-17!41;UBERON:0001890!7.34e-17!41;UBERON:0006240!7.34e-17!41;UBERON:0002049!1.09e-16!79;UBERON:0007798!1.09e-16!79;UBERON:0003080!1.16e-16!42;UBERON:0000055!2.93e-16!69;UBERON:0003056!5.13e-16!61;UBERON:0001893!2.61e-15!34;UBERON:0002020!3.55e-15!34;UBERON:0003528!3.55e-15!34;UBERON:0000475!9.00e-15!365;UBERON:0002791!9.94e-15!33;UBERON:0000477!2.20e-14!286;UBERON:0001869!5.22e-14!32;UBERON:0000924!2.91e-13!173;UBERON:0006601!2.91e-13!173;UBERON:0001637!3.18e-13!42;UBERON:0003509!3.18e-13!42;UBERON:0004572!3.18e-13!42;UBERON:0004121!8.26e-13!169;UBERON:0000033!1.80e-12!123;UBERON:0000153!5.44e-12!129;UBERON:0007811!5.44e-12!129;UBERON:0004573!6.32e-11!33;UBERON:0004571!6.32e-11!33;UBERON:0000956!8.74e-11!25;UBERON:0000203!8.74e-11!25;UBERON:0002385!1.24e-10!63;UBERON:0001015!1.24e-10!63;UBERON:0000383!1.24e-10!63;UBERON:0001134!2.30e-10!61;UBERON:0002036!2.30e-10!61;UBERON:0003082!2.30e-10!61;UBERON:0002619!1.00e-09!22;UBERON:0004290!1.74e-09!70;UBERON:0003914!2.57e-09!118;UBERON:0000468!4.73e-09!659;UBERON:0001950!7.17e-09!20;UBERON:0000947!1.84e-08!21;UBERON:0010191!1.84e-08!21;UBERON:0000914!2.38e-08!83;UBERON:0002329!2.38e-08!83;UBERON:0003077!2.38e-08!83;UBERON:0003059!2.38e-08!83;UBERON:0007282!2.38e-08!83;UBERON:0009618!2.38e-08!83;UBERON:0007285!2.38e-08!83;UBERON:0000467!2.76e-07!625;UBERON:0000480!3.58e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.48e-13;34!UBERON:0003528;3.70e-13;34!UBERON:0002020;3.70e-13;34!UBERON:0001869;7.38e-13;32!UBERON:0002791;7.81e-13;32!UBERON:0002780;1.56e-12;41!UBERON:0001890;1.56e-12;41!UBERON:0000073;1.68e-11;53!UBERON:0002616;1.68e-11;53!UBERON:0000956;7.17e-11;25!UBERON:0000203;7.17e-11;25!UBERON:0004573;2.07e-10;33!UBERON:0004571;2.07e-10;33!UBERON:0001637;2.25e-10;42!UBERON:0003509;2.25e-10;42!UBERON:0004572;2.25e-10;42!UBERON:0001017;3.63e-10;75!UBERON:0002619;8.53e-10;22!UBERON:0001016;5.71e-09;83!UBERON:0001950;6.12e-09;20!UBERON:0007500;6.29e-09;56!UBERON:0001981;6.29e-09;56!UBERON:0004537;6.29e-09;56!UBERON:0000955;9.40e-09;68!UBERON:0000947;1.66e-08;21!UBERON:0010191;1.66e-08;21!UBERON:0000055;7.13e-08;65!UBERON:0007023;1.59e-07;114!UBERON:0004535;1.72e-07;109!UBERON:0001009;1.77e-07;112 | |||
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| ||
|short_description=p1@JAM3 | |short_description=p1@JAM3 | ||
}} | }} |
Latest revision as of 20:22, 16 September 2015
Short description: | p1@JAM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JAM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000441717, ENST00000531698, ENST00000532252, ENST00000534549_5end |
EntrezGene: | JAM3 |
HGNC: | 15532 |
UniProt: | B3KWG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.17e-10 | 61 |
electrically active cell | 2.17e-10 | 61 |
muscle precursor cell | 3.47e-10 | 58 |
myoblast | 3.47e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.47e-10 | 58 |
muscle cell | 4.89e-10 | 55 |
mesodermal cell | 2.07e-09 | 121 |
vascular associated smooth muscle cell | 2.67e-08 | 32 |
smooth muscle cell | 1.04e-07 | 43 |
smooth muscle myoblast | 1.04e-07 | 43 |