FFCP PHASE1:Hg19::chr19:19729458..19729469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80714 | |EntrezGene=80714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13403 | |HGNC=13403 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_uc002nmy.2,uc010xqz.1,uc010xra.1_5end | |association_with_transcript=-19bp_to_uc002nmy.2,uc010xqz.1,uc010xra.1_5end | ||
|cluster_id=chr19:19729458..19729469,- | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_2_at_PBX4_5end | |description=CAGE_peak_2_at_PBX4_5end | ||
|id=chr19:19729458..19729469,- | |id=chr19:19729458..19729469,- | ||
|ontology_enrichment_celltype=CL:0000838!5.23e-17!52;CL:0000542!1.97e-16!53;CL:0000051!1.97e-16!53;CL:0000084!1.90e-15!25;CL:0000827!1.90e-15!25;CL:0000791!8.80e-14!18;CL:0000789!8.80e-14!18;CL:0002420!8.80e-14!18;CL:0002419!8.80e-14!18;CL:0000790!8.80e-14!18;CL:0000738!7.64e-09!140;CL:0000624!7.53e-08!6;CL:0002087!1.95e-07!119;CL:0000625!3.50e-07!11;CL:0000080!4.09e-07!6 | |ontology_enrichment_celltype=CL:0000838!5.23e-17!52;CL:0000542!1.97e-16!53;CL:0000051!1.97e-16!53;CL:0000084!1.90e-15!25;CL:0000827!1.90e-15!25;CL:0000791!8.80e-14!18;CL:0000789!8.80e-14!18;CL:0002420!8.80e-14!18;CL:0002419!8.80e-14!18;CL:0000790!8.80e-14!18;CL:0000738!7.64e-09!140;CL:0000624!7.53e-08!6;CL:0002087!1.95e-07!119;CL:0000625!3.50e-07!11;CL:0000080!4.09e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.60e-26;18!CL:0000789;2.60e-26;18!CL:0002419;2.60e-26;18!CL:0000084;7.22e-25;25!CL:0000624;1.58e-21;6!CL:0000623;4.61e-12;3!CL:0000226;2.30e-11;3!CL:0000842;2.30e-11;3!CL:0000625;3.66e-11;11!CL:0000898;5.13e-11;3!CL:0000542;1.76e-10;53!CL:0000815;1.41e-07;2!CL:0000792;1.41e-07;2!CL:0002677;1.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.58e-26,18;CL:0000789,1.58e-26,18;CL:0002420,1.58e-26,18;CL:0002419,1.58e-26,18;CL:0000790,1.58e-26,18;CL:0000084,4.79e-25,25;CL:0000827,4.79e-25,25;CL:0000624,6.15e-22,6;CL:0000838,4.75e-18,52;CL:0000542,1.27e-17,53;CL:0000051,1.27e-17,53;CL:0000623,4.40e-12,3;CL:0000825,4.40e-12,3;CL:0000898,1.84e-11,3;CL:0000226,3.12e-11,3;CL:0000842,3.12e-11,3;CL:0000625,3.99e-11,11;CL:0000738,5.72e-11,136;CL:0002087,1.61e-10,115;CL:0000988,2.91e-10,177;CL:0000037,2.24e-09,168;CL:0000815,5.40e-08,2;CL:0000792,5.40e-08,2;CL:0002677,5.40e-08,2;CL:0002031,5.80e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.60e-26;18!CL:0000051;1.76e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.14e-10;15!UBERON:0000179;2.14e-10;15!UBERON:0000463;2.14e-10;15!UBERON:0000473;3.65e-07;8!UBERON:0002390;7.45e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.56e-10,15;UBERON:0000179,2.56e-10,15;UBERON:0000463,2.56e-10,15;UBERON:0000473,3.46e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.61130724598361,0.0821005894499457,0.314843125254717,0.786728553697808,1.15148819429164,0.309632246632152,0,0,0,0.0774672005803016,0,0,0,2.80762226458198,1.30206522429511,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,1.76171156811282,0.382273228125229,0,3.36305137788922,0,3.14735632182133,8.25322601773246,7.40165396398233,2.17342444007882,1.95553359980154,3.31413464014313,1.94826728407911,1.6711568532776,1.76763544484902,0.886135578334485,2.16643091012012,2.81800903396485,2.21100890851793,1.80881695064044,2.21080014228679,1.15921234294021,1.18629250529648,0.802622484269139,1.04535523804977,1.0197840842781,3.44898444241729,1.71813722741315,0.506039384039006,1.27426165729639,1.30216690771284,0,0.602300476311091,0.255973222308837,1.24930726552346,0.710331756132051,0,4.23374160771938,8.02320587350522,4.77920532813237,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,2.56139988262505,7.76259269494262,5.77543663258868,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,1.03384013061444,3.45142721309787,2.66818894508611,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.70894156152249,0,0,0,0,0.79312517629427,0,0.962479855263359,0.735120647943095,0,0,0.711418433484141,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.333698283423817,0,0,1.23087398947712,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0.276283915531148,0.503865495708552,0,0.123084805461069,0,0.0898683511473268,0,0,0.493217028184668,2.3948309234694,0,0,0,0,0,0,0,0,0.508507300585533,0.472775363535873,0.689486746482929,1.16641845353302,0.520874984799877,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,0.86494757262552,1.25306339406546,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0,0,0.661983911750998,0,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0,0.391102765469606,0,0.213452994739353,0.799238438328521,0.144090417154106,0,0.171594997861965,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,1.27746588066972,0,0.788662062837943,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0.339936274560377,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,1.38348634936231,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0.327609848846413,0,0.422624246717254,1.59989916683944,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0.218419276384028,0.169732529954025,0.425149840203366,0.247871528518004,0,0,0.315446980005013,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0.261906694481422,0.163771917510097,0,0.202612753855184,0,0,0.0634158101939068,2.18789923607288,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0.354581522651905,0.111231401892069,0,0,0,1.82631744101899,0,0,0.142953088353313,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0.68732060563215,0.62041277132864,0,0,0.392600934460972,0.121917924982269,0,0,0,0,0,0,0.356760272332706,0,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| ||
|short_description=p2@PBX4 | |short_description=p2@PBX4 | ||
}} | }} |
Latest revision as of 20:21, 16 September 2015
Short description: | p2@PBX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PBX4_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -19bp_to_uc002nmy.2, uc010xqz.1, uc010xra.1_5end |
EntrezGene: | PBX4 |
HGNC: | 13403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.58e-26 | 18 |
alpha-beta T cell | 1.58e-26 | 18 |
immature T cell | 1.58e-26 | 18 |
mature T cell | 1.58e-26 | 18 |
immature alpha-beta T cell | 1.58e-26 | 18 |
T cell | 4.79e-25 | 25 |
pro-T cell | 4.79e-25 | 25 |
CD4-positive, alpha-beta T cell | 6.15e-22 | 6 |
lymphoid lineage restricted progenitor cell | 4.75e-18 | 52 |
lymphocyte | 1.27e-17 | 53 |
common lymphoid progenitor | 1.27e-17 | 53 |
natural killer cell | 4.40e-12 | 3 |
pro-NK cell | 4.40e-12 | 3 |
naive T cell | 1.84e-11 | 3 |
single nucleate cell | 3.12e-11 | 3 |
mononuclear cell | 3.12e-11 | 3 |
CD8-positive, alpha-beta T cell | 3.99e-11 | 11 |
leukocyte | 5.72e-11 | 136 |
nongranular leukocyte | 1.61e-10 | 115 |
hematopoietic cell | 2.91e-10 | 177 |
hematopoietic stem cell | 2.24e-09 | 168 |
regulatory T cell | 5.40e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.40e-08 | 2 |
naive regulatory T cell | 5.40e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 5.80e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 2.56e-10 | 15 |
haemolymphatic fluid | 2.56e-10 | 15 |
organism substance | 2.56e-10 | 15 |
testis | 3.46e-07 | 8 |