FFCP PHASE1:Hg19::chr11:133938903..133938914,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15532 | |||
|TSSclassifier=strong | |||
|UniProt=B3KWG9 | |||
|association_with_transcript=-51bp_to_ENST00000441717,ENST00000531698,ENST00000532252,ENST00000534549_5end | |||
|cluster_id=chr11:133938903..133938914,+ | |||
|description=CAGE_peak_3_at_JAM3_5end | |||
|id=chr11:133938903..133938914,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.25e-23!180;CL:0000183!7.45e-12!59;CL:0000680!2.10e-11!57;CL:0000056!2.10e-11!57;CL:0000355!2.10e-11!57;CL:0000057!4.04e-11!75;CL:0000393!4.43e-11!60;CL:0000211!4.43e-11!60;CL:0000187!1.08e-10!54;CL:0000192!3.80e-09!42;CL:0000514!3.80e-09!42;CL:0000359!5.47e-08!32;CL:0000222!1.09e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.96e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.83e-11,76;CL:0000680,1.03e-10,58;CL:0000056,1.03e-10,58;CL:0000355,1.03e-10,58;CL:0000187,7.09e-10,55;CL:0000393,2.69e-09,61;CL:0000211,2.69e-09,61;CL:0000192,1.72e-08,43;CL:0000514,1.72e-08,43;CL:0000359,1.82e-08,32;CL:0000222,1.34e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.07e-17!365;UBERON:0000119!2.52e-15!312;UBERON:0000483!8.08e-15!309;UBERON:0002346!1.02e-14!90;UBERON:0003075!3.63e-14!86;UBERON:0007284!3.63e-14!86;UBERON:0005743!7.27e-14!86;UBERON:0000924!1.27e-13!173;UBERON:0006601!1.27e-13!173;UBERON:0000073!3.24e-13!94;UBERON:0001016!3.24e-13!94;UBERON:0004121!4.65e-13!169;UBERON:0001017!5.49e-13!82;UBERON:0000033!7.64e-12!123;UBERON:0000914!1.25e-11!83;UBERON:0002329!1.25e-11!83;UBERON:0003077!1.25e-11!83;UBERON:0003059!1.25e-11!83;UBERON:0007282!1.25e-11!83;UBERON:0009618!1.25e-11!83;UBERON:0007285!1.25e-11!83;UBERON:0003056!1.37e-11!61;UBERON:0004290!1.73e-11!70;UBERON:0002385!2.81e-11!63;UBERON:0001015!2.81e-11!63;UBERON:0000383!2.81e-11!63;UBERON:0001009!2.91e-11!113;UBERON:0000153!4.20e-11!129;UBERON:0007811!4.20e-11!129;UBERON:0001134!6.55e-11!61;UBERON:0002036!6.55e-11!61;UBERON:0003082!6.55e-11!61;UBERON:0000955!9.90e-11!69;UBERON:0006238!9.90e-11!69;UBERON:0000025!1.03e-10!194;UBERON:0004535!1.27e-10!110;UBERON:0004111!1.92e-10!241;UBERON:0002049!5.80e-10!79;UBERON:0007798!5.80e-10!79;UBERON:0000477!1.39e-09!286;UBERON:0001981!1.46e-09!60;UBERON:0007500!1.46e-09!60;UBERON:0004537!1.46e-09!60;UBERON:0006965!1.46e-09!60;UBERON:0002616!1.49e-09!59;UBERON:0001049!1.66e-09!57;UBERON:0005068!1.66e-09!57;UBERON:0006241!1.66e-09!57;UBERON:0007135!1.66e-09!57;UBERON:0000481!1.89e-09!347;UBERON:0007023!1.95e-09!115;UBERON:0004872!2.42e-09!84;UBERON:0002780!2.94e-09!41;UBERON:0001890!2.94e-09!41;UBERON:0006240!2.94e-09!41;UBERON:0003080!1.20e-08!42;UBERON:0000468!1.34e-08!659;UBERON:0000055!1.94e-08!69;UBERON:0000486!2.20e-08!82;UBERON:0001893!5.75e-08!34;UBERON:0002791!9.58e-08!33;UBERON:0001869!1.18e-07!32;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0001637!1.45e-07!42;UBERON:0003509!1.45e-07!42;UBERON:0004572!1.45e-07!42;UBERON:0000467!2.55e-07!625;UBERON:0000480!3.80e-07!626;UBERON:0004573!8.80e-07!33;UBERON:0004571!8.80e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.71e-13,132;UBERON:0007503,2.71e-12,78;UBERON:0007524,1.91e-11,73;UBERON:0000119,1.98e-11,309;UBERON:0003077,2.35e-11,72;UBERON:0007285,2.35e-11,72;UBERON:0000483,4.78e-11,306;UBERON:0002329,4.86e-11,71;UBERON:0003059,4.86e-11,71;UBERON:0007282,4.86e-11,71;UBERON:0004290,4.86e-11,71;UBERON:0009618,4.86e-11,71;UBERON:0002346,9.76e-11,86;UBERON:0002385,1.59e-10,64;UBERON:0001015,1.59e-10,64;UBERON:0000383,1.59e-10,64;UBERON:0003075,1.90e-10,82;UBERON:0007284,1.90e-10,82;UBERON:0001134,2.49e-10,62;UBERON:0002036,2.49e-10,62;UBERON:0003082,2.49e-10,62;UBERON:0001017,1.16e-09,81;UBERON:0000025,2.59e-09,192;UBERON:0004111,2.86e-09,240;UBERON:0003056,3.80e-09,61;UBERON:0000486,7.76e-09,83;UBERON:0001009,9.00e-09,112;UBERON:0001016,9.74e-09,89;UBERON:0007500,1.06e-08,59;UBERON:0001981,1.06e-08,59;UBERON:0004537,1.06e-08,59;UBERON:0006965,1.06e-08,59;UBERON:0000955,2.01e-08,68;UBERON:0006238,2.01e-08,68;UBERON:0004535,2.62e-08,109;UBERON:0004121,2.83e-08,171;UBERON:0000924,2.83e-08,171;UBERON:0006601,2.83e-08,171;UBERON:0002049,2.97e-08,78;UBERON:0007798,2.97e-08,78;UBERON:0004872,4.04e-08,83;UBERON:0001049,7.10e-08,56;UBERON:0005068,7.10e-08,56;UBERON:0006241,7.10e-08,56;UBERON:0007135,7.10e-08,56;UBERON:0010371,1.14e-07,104;UBERON:0000055,1.22e-07,68;UBERON:0002780,1.63e-07,41;UBERON:0001890,1.63e-07,41;UBERON:0003080,1.63e-07,41;UBERON:0006240,1.63e-07,41;UBERON:0004573,3.95e-07,33;UBERON:0004571,3.95e-07,33;UBERON:0000073,4.96e-07,53;UBERON:0002616,4.96e-07,53;UBERON:0007023,5.36e-07,114;UBERON:0001637,5.53e-07,42;UBERON:0003509,5.53e-07,42;UBERON:0004572,5.53e-07,42 | |||
|phase1_expression=2.18014055124668,1.49870366723688,1.69145284915165,3.00219895059391,0.446961094427288,1.74467704820074,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0,0.866364470720326,2.65117900582333,1.34465029290355,0,0.730310090387373,1.95173119516203,1.10808952269109,1.02000345622126,0.626909442956176,1.43117993565528,1.23186982565596,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0,0,0.444859689486181,0,0,0,0,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,1.53435074212236,3.2529523714611,2.50668955317945,1.30361867064741,2.3858578411533,2.91980922181582,0.945348171640679,1.77383517970051,0.790513071238134,1.30979075497713,1.45718115317017,2.22470665670658,0,0,0,0,0,0,1.19257444420023,1.72046919021225,1.04142150482278,0.56530794192401,1.67799774483962,0.550236083880135,0.626984899610432,0,1.06729878806013,1.67360306382335,0.805658634218294,0,0.24406205754817,0,0,1.87529429396568,2.02076435363553,2.25222960966644,3.06633274931766,0.949265659568129,1.83201743930407,0,0,0.436094052142534,1.49091585508596,0.886413581652058,1.98613771219828,1.72101972449288,1.06400514659507,0,2.1349799145941,0.74000264525148,2.48968828319813,1.0776853765575,1.9615428373615,2.11900398702904,2.30470369792,1.40592859100278,1.24864030732128,0.570471821544449,1.04614076386261,1.40921398372518,1.13311061057692,1.96631129383148,2.65400422631361,0.245668634623536,1.03325781175765,2.37600571456411,1.23633464639278,3.64064544775211,0.718618141816238,0.505008341862199,0.500474079487857,1.93944880838928,2.19488810440419,0.612975591598039,1.35214253015937,1.02088964844019,1.07633781413317,1.70845911054854,2.11931901159562,3.00091096084402,2.16410311400722,0,1.48893485065272,2.53164498361899,2.53336213419116,0.504867548488229,1.28869858099219,2.42469085228218,3.19508633264953,1.81353776809752,1.3564847384839,0,0,0,0,0.397589304964456,0.348581828608555,0.310983165046111,0,0,1.56449532329816,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.703702806881416,0.0925884451585296,0.977424915930974,2.07986957055916,2.88662684050547,0.811512834825538,1.29149563659404,0.866198686566443,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,1.16253575405585,0.766765358330422,0,0,0,0,0,0.825472625798197,0.763976851116555,0,1.71072446022705,0.514137463516618,1.20137223137567,0.285826432630578,2.01835951821649,1.74384027533312,0.36669142910475,1.55126058909333,0,0.845302752556,0.797814349754612,2.08014873822732,1.54324424557285,1.41849132023278,1.5985330740966,0.857867961948885,0.542621605391443,0.823240336780769,1.30294473717494,1.06617584622764,0.791951872933429,1.80863626235752,0.871533458600294,0.99972991182057,0,0,0,0.958499421966331,0,2.85273810081437,1.59259437334337,1.2328579353023,1.79060963239896,0,0.197030760201927,0,0.128343036279748,0.76228387266739,1.30139853857622,1.54657762555539,0.837581326671744,0.637938751653163,0,0,0.414415513436035,0.24538298343828,1.00034104211935,1.08506009479894,1.03985430765404,0.178428988797162,0.788512075169673,1.7571212248907,1.80567659836631,0,1.03473071292505,1.99267679560631,0.553107505625109,1.47702144595741,0.195801157462741,2.05886054286514,0.206768026122887,0,0.106727557803444,0,0,0,1.48864684691266,2.14846762603287,1.12264037773229,1.40953064181271,0,1.12597744800525,1.48418066444991,1.3878872442239,1.77561725313127,1.88892458831761,1.03850885836724,1.39452454151951,0,0.200506470303285,0.0920809889358963,1.83703117063371,1.27463817604702,0.655622074797121,0,0.385076685522074,1.56869953835371,2.92278449306521,0.844413031143006,2.27466768141793,2.2112181685947,1.72732732881711,0,2.16757150035082,1.50506932156456,1.01950509218015,0,0,0,0,1.53870075069834,0.656029291399411,1.62689197332152,0.618246069886334,0,0,0.574265537996172,0,0,1.93341436584244,1.07834031980251,1.84204409671355,1.24052915236078,1.18162269355101,0.870100163485371,1.19317278382541,2.49289699810865,0,0,0.127612712494584,0.2023155617111,1.85938219718914,5.03699754929024,4.1822236209636,0.308033580176089,3.19383618190213,0,2.40921484835096,2.14687330112987,0,2.84741482246853,1.14378116354295,1.02359116524534,0.42793898803392,2.86382923133343,0.78494864019923,1.43897966066652,2.19629623788844,1.29593642580255,2.22400729730648,1.58510321173008,1.68503382495592,0.48763373908959,3.89941583410055,4.22600587027022,1.36499911407986,1.55545975149084,2.26016233240486,2.2054613741845,1.99031692572366,1.31535265576129,0.578775534266688,1.9676842561399,0.811641507850816,0.30982349809975,1.97186921772569,2.5814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| |||
|short_description=p3@JAM3 | |||
}} |
Latest revision as of 20:21, 16 September 2015
Short description: | p3@JAM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JAM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_ENST00000441717, ENST00000531698, ENST00000532252, ENST00000534549_5end |
EntrezGene: | JAM3 |
HGNC: | 15532 |
UniProt: | B3KWG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.83e-11 | 76 |
muscle precursor cell | 1.03e-10 | 58 |
myoblast | 1.03e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-10 | 58 |
muscle cell | 7.09e-10 | 55 |
electrically responsive cell | 2.69e-09 | 61 |
electrically active cell | 2.69e-09 | 61 |
smooth muscle cell | 1.72e-08 | 43 |
smooth muscle myoblast | 1.72e-08 | 43 |
vascular associated smooth muscle cell | 1.82e-08 | 32 |
mesodermal cell | 1.34e-07 | 121 |