FFCP PHASE1:Hg19::chr10:124134136..124134153,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:124134136..124134153,+
|short_description=p3@PLEKHA1
|description=CAGE_peak_3_at_PLEKHA1_5end
|association_with_transcript=-19bp_to_ENST00000479786_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59338 | |EntrezGene=59338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14335 | |HGNC=14335 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000479786_5end | |||
|cluster_id=chr10:124134136..124134153,+ | |||
|description=CAGE_peak_3_at_PLEKHA1_5end | |||
|id=chr10:124134136..124134153,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.27e-07,18;CL:0000789,3.27e-07,18;CL:0002420,3.27e-07,18;CL:0002419,3.27e-07,18;CL:0000790,3.27e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.72e-19!115;UBERON:0005743!2.75e-11!86;UBERON:0001017!5.84e-11!82;UBERON:0004121!1.03e-10!169;UBERON:0000924!1.60e-10!173;UBERON:0006601!1.60e-10!173;UBERON:0000073!1.62e-10!94;UBERON:0001016!1.62e-10!94;UBERON:0000033!3.14e-10!123;UBERON:0000153!4.14e-10!129;UBERON:0007811!4.14e-10!129;UBERON:0001049!5.19e-10!57;UBERON:0005068!5.19e-10!57;UBERON:0006241!5.19e-10!57;UBERON:0007135!5.19e-10!57;UBERON:0003080!6.40e-10!42;UBERON:0002616!8.99e-10!59;UBERON:0000955!1.43e-09!69;UBERON:0006238!1.43e-09!69;UBERON:0003075!1.68e-09!86;UBERON:0007284!1.68e-09!86;UBERON:0002780!1.84e-09!41;UBERON:0001890!1.84e-09!41;UBERON:0006240!1.84e-09!41;UBERON:0002346!3.76e-09!90;UBERON:0003056!9.02e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.92e-07;114!UBERON:0002780;6.87e-07;41!UBERON:0001890;6.87e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-22,114;UBERON:0000073,1.58e-10,53;UBERON:0002616,1.58e-10,53;UBERON:0001049,4.92e-10,56;UBERON:0005068,4.92e-10,56;UBERON:0006241,4.92e-10,56;UBERON:0007135,4.92e-10,56;UBERON:0002780,5.85e-10,41;UBERON:0001890,5.85e-10,41;UBERON:0003080,5.85e-10,41;UBERON:0006240,5.85e-10,41;UBERON:0001017,1.20e-09,81;UBERON:0001016,4.17e-09,89;UBERON:0000955,1.83e-08,68;UBERON:0006238,1.83e-08,68;UBERON:0003075,4.72e-08,82;UBERON:0007284,4.72e-08,82;UBERON:0003056,1.43e-07,61;UBERON:0010371,3.59e-07,104;UBERON:0002346,4.05e-07,86;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171;UBERON:0001894,8.58e-07,7;UBERON:0006222,8.58e-07,7 | |||
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| ||
|short_description=p3@PLEKHA1 | |||
}} | }} |
Latest revision as of 20:16, 16 September 2015
Short description: | p3@PLEKHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000479786_5end |
EntrezGene: | PLEKHA1 |
HGNC: | 14335 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.27e-07 | 18 |
alpha-beta T cell | 3.27e-07 | 18 |
immature T cell | 3.27e-07 | 18 |
mature T cell | 3.27e-07 | 18 |
immature alpha-beta T cell | 3.27e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.41e-22 | 114 |
regional part of nervous system | 1.58e-10 | 53 |
regional part of brain | 1.58e-10 | 53 |
neural tube | 4.92e-10 | 56 |
neural rod | 4.92e-10 | 56 |
future spinal cord | 4.92e-10 | 56 |
neural keel | 4.92e-10 | 56 |
regional part of forebrain | 5.85e-10 | 41 |
forebrain | 5.85e-10 | 41 |
anterior neural tube | 5.85e-10 | 41 |
future forebrain | 5.85e-10 | 41 |
central nervous system | 1.20e-09 | 81 |
nervous system | 4.17e-09 | 89 |
brain | 1.83e-08 | 68 |
future brain | 1.83e-08 | 68 |
neural plate | 4.72e-08 | 82 |
presumptive neural plate | 4.72e-08 | 82 |
pre-chordal neural plate | 1.43e-07 | 61 |
ecto-epithelium | 3.59e-07 | 104 |
neurectoderm | 4.05e-07 | 86 |
ectoderm-derived structure | 5.65e-07 | 171 |
ectoderm | 5.65e-07 | 171 |
presumptive ectoderm | 5.65e-07 | 171 |
diencephalon | 8.58e-07 | 7 |
future diencephalon | 8.58e-07 | 7 |