FFCP PHASE1:Hg19::chr9:16728327..16728338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |EntrezGene=54796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |HGNC=30988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_uc003zmo.1_5end | |association_with_transcript=-164bp_to_uc003zmo.1_5end | ||
|cluster_id=chr9:16728327..16728338,- | |||
|description=CAGE_peak_5_at_BNC2_5end | |description=CAGE_peak_5_at_BNC2_5end | ||
|id=chr9:16728327..16728338,- | |id=chr9:16728327..16728338,- | ||
|ontology_enrichment_celltype=CL:0000055!1.72e-10!180;CL:0000710!3.69e-08!20;CL:0000133!4.62e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.72e-10!180;CL:0000710!3.69e-08!20;CL:0000133!4.62e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.20e-11;10!CL:0000710;6.05e-10;20!CL:0000188;5.54e-09;9!CL:0002567;2.21e-08;3!CL:0000594;4.12e-08;3!CL:0000147;6.18e-08;14!CL:0000064;8.53e-07;3!CL:0000067;8.53e-07;3!CL:0005012;8.53e-07;3!CL:0002304;8.53e-07;3!CL:0000708;8.53e-07;3!CL:0000075;8.60e-07;27 | |ontology_enrichment_celltype_v019=CL:0000148;1.20e-11;10!CL:0000710;6.05e-10;20!CL:0000188;5.54e-09;9!CL:0002567;2.21e-08;3!CL:0000594;4.12e-08;3!CL:0000147;6.18e-08;14!CL:0000064;8.53e-07;3!CL:0000067;8.53e-07;3!CL:0005012;8.53e-07;3!CL:0002304;8.53e-07;3!CL:0000708;8.53e-07;3!CL:0000075;8.60e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.09e-11,10;CL:0000541,1.09e-11,10;CL:0000710,3.68e-10,20;CL:0000188,4.24e-09,9;CL:0002567,2.13e-08,3;CL:0000594,4.03e-08,3;CL:0000147,5.77e-08,14;CL:0000064,3.51e-07,3;CL:0000067,3.51e-07,3;CL:0005012,3.51e-07,3;CL:0002304,3.51e-07,3;CL:0000075,6.10e-07,27;CL:0000708,9.78e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.03e-08!14 | |ontology_enrichment_disease=DOID:2394!2.03e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!5.31e-07!11;UBERON:0006876!5.31e-07!11 | |ontology_enrichment_uberon=UBERON:0002200!5.31e-07!11;UBERON:0006876!5.31e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.04e-08;11!UBERON:0005284;2.41e-07;5!UBERON:0003210;8.53e-07;3!UBERON:0001778;8.53e-07;3!UBERON:0001775;8.53e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0006876;1.04e-08;11!UBERON:0005284;2.41e-07;5!UBERON:0003210;8.53e-07;3!UBERON:0001778;8.53e-07;3!UBERON:0001775;8.53e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,3.42e-09,11;UBERON:0005284,1.12e-07,5;UBERON:0001778,3.51e-07,3;UBERON:0001775,3.51e-07,3;UBERON:0003210,9.78e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0,0.672325146451775,0,0,0,1.47745269692145,0.816002764977012,1.56727360739044,0,0.273748850145768,0,4.50839093912912,3.28402357799783,4.25038219093868,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.722878304769133,1.00267582127178,0.144846518960824,0,0,1.79616152611729,1.77383517970051,1.40535657109002,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.05927344650575,2.29469296599051,0,0,0,0,0.933633106199299,0.134710672069688,0.490385709340376,2.72443369760877,2.30470369792,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0.484938170456436,0,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,3.87337155182231,5.72982638337417,3.51652341630141,3.4214489204541,4.52440967894623,2.40274446275134,6.5740079505033,1.45770409648969,1.30788020649984,1.10007428731425,0.517086863031111,0,0,0,0,0,0,0.532844358032199,0.57191197463259,0,0,0,1.42156779497018,1.58390374586686,2.41151501647669,0,2.69927076191554,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0.542530047399471,0.415941723061614,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,1.37060810223918,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.925258162815933,0.532685175939381,0.821271560138091,1.03850885836724,0.581051892299796,0,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.676695028044854,2.7728751080636,2.91656981979646,1.37836572484531,3.11518710117994,3.33538396002726,2.81247870473133,0.890320356467374,0,0,0,0,0,0.94443704049192,0,0.924100740528266,0,0,0.18532421910392,0,1.86079184679834,1.89827654831236,0.38126038784765,0,0.42793898803392,0.636406495851874,0.78494864019923,0.719489830333259,1.09814811894422,1.06031162111118,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,2.54529777516683,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,1.06428319221179,0,0.987884678879706,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0,0.333926115068718,0,19.8457883640314,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.179736702294654,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,5.55599983786535,0,0,0,0,0,0,0.10893846351899,0,1.84680620409113,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0.794682894901893,0,0.163232808159148,0,0,1.99052386215701,0.265372693510018,0.611030144933625,0.593042257361244,0,0.313265848516366,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,1.01098527405581,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.290967049465258,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.85381197895741,0,0,0,1.88754497648161,0,0,0,0.543616824294456,0.313808538937,0,2.60055530911367,0,0,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,4.48768659948658,0,0.136203406111576,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,1.42939065274673,0.662091970365432,0,1.08599920350743,0,0,0,0,3.23737241392301,0.339936274560377,0,0,0.129282956361551,0.26446520348538,0,0,0,0.314408610199332,0,0,0.395223263795889,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0.250381861413,0,0.332787154610557,0.124192805882767,0,0.124980407962107,1.97143852804142,1.99825733481477,0.470531639396343,0,0,1.19403842309499,1.16856654923612,2.21922344601045,0.378806010550178,0.251567901752575,0,0,1.51230923763239,1.24349760466224,0.443565449968902,1.27437413730962,0.449803112163605,2.01841843939137,2.90294345488599,0.53168342911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| ||
|short_description=p5@BNC2 | |short_description=p5@BNC2 | ||
}} | }} |
Latest revision as of 20:09, 16 September 2015
Short description: | p5@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -164bp_to_uc003zmo.1_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.09e-11 | 10 |
melanoblast | 1.09e-11 | 10 |
neurecto-epithelial cell | 3.68e-10 | 20 |
cell of skeletal muscle | 4.24e-09 | 9 |
light melanocyte | 2.13e-08 | 3 |
skeletal muscle satellite cell | 4.03e-08 | 3 |
pigment cell | 5.77e-08 | 14 |
ciliated cell | 3.51e-07 | 3 |
ciliated epithelial cell | 3.51e-07 | 3 |
multi-ciliated epithelial cell | 3.51e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.51e-07 | 3 |
columnar/cuboidal epithelial cell | 6.10e-07 | 27 |
leptomeningeal cell | 9.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 3.42e-09 | 11 |
brain vasculature | 1.12e-07 | 5 |
ciliary epithelium | 3.51e-07 | 3 |
ciliary body | 3.51e-07 | 3 |
blood-cerebrospinal fluid barrier | 9.78e-07 | 3 |