FFCP PHASE1:Hg19::chr2:127864608..127864688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=274 | |EntrezGene=274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1052 | |HGNC=1052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000376113_5end | |association_with_transcript=-31bp_to_ENST00000376113_5end | ||
|cluster_id=chr2:127864608..127864688,- | |||
|coexpression_cluster_id=C3182 | |||
|description=CAGE_peak_1_at_BIN1_5end | |description=CAGE_peak_1_at_BIN1_5end | ||
|id=chr2:127864608..127864688,- | |id=chr2:127864608..127864688,- | ||
|ontology_enrichment_celltype=CL:0000222!4.40e-10!119;CL:0000183!7.73e-10!59;CL:0000055!6.34e-09!180;CL:0000680!1.86e-08!57;CL:0000056!1.86e-08!57;CL:0000355!1.86e-08!57;CL:0000187!6.49e-08!54;CL:1000497!5.51e-07!18;CL:0002518!5.51e-07!18;CL:1000449!5.78e-07!16 | |ontology_enrichment_celltype=CL:0000222!4.40e-10!119;CL:0000183!7.73e-10!59;CL:0000055!6.34e-09!180;CL:0000680!1.86e-08!57;CL:0000056!1.86e-08!57;CL:0000355!1.86e-08!57;CL:0000187!6.49e-08!54;CL:1000497!5.51e-07!18;CL:0002518!5.51e-07!18;CL:1000449!5.78e-07!16 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.54e-10,121;CL:0000680,7.99e-09,58;CL:0000056,7.99e-09,58;CL:0000355,7.99e-09,58;CL:0000187,2.83e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.96e-35!347;UBERON:0000119!2.00e-33!312;UBERON:0000483!1.50e-32!309;UBERON:0000477!7.18e-32!286;UBERON:0000475!5.86e-30!365;UBERON:0000955!4.05e-27!69;UBERON:0006238!4.05e-27!69;UBERON:0004111!4.72e-27!241;UBERON:0000025!5.44e-27!194;UBERON:0000922!8.29e-27!612;UBERON:0000468!1.86e-26!659;UBERON:0002050!1.03e-25!605;UBERON:0005423!1.03e-25!605;UBERON:0000923!2.24e-25!604;UBERON:0005291!2.24e-25!604;UBERON:0006598!2.24e-25!604;UBERON:0002532!2.24e-25!604;UBERON:0001049!4.38e-25!57;UBERON:0005068!4.38e-25!57;UBERON:0006241!4.38e-25!57;UBERON:0007135!4.38e-25!57;UBERON:0002616!4.78e-25!59;UBERON:0005743!1.06e-24!86;UBERON:0000073!6.23e-24!94;UBERON:0001016!6.23e-24!94;UBERON:0000467!7.42e-24!625;UBERON:0001017!7.43e-24!82;UBERON:0003075!1.54e-23!86;UBERON:0007284!1.54e-23!86;UBERON:0000480!1.80e-23!626;UBERON:0000033!1.02e-21!123;UBERON:0002346!4.64e-21!90;UBERON:0000153!2.50e-20!129;UBERON:0007811!2.50e-20!129;UBERON:0007023!2.06e-19!115;UBERON:0003056!4.66e-19!61;UBERON:0003080!1.64e-18!42;UBERON:0002780!3.27e-18!41;UBERON:0001890!3.27e-18!41;UBERON:0006240!3.27e-18!41;UBERON:0000062!9.67e-18!511;UBERON:0005256!1.15e-16!143;UBERON:0002020!4.11e-15!34;UBERON:0003528!4.11e-15!34;UBERON:0001893!4.18e-15!34;UBERON:0000064!1.03e-14!219;UBERON:0002791!1.49e-14!33;UBERON:0004121!2.23e-14!169;UBERON:0001869!7.69e-14!32;UBERON:0000924!3.36e-13!173;UBERON:0006601!3.36e-13!173;UBERON:0003104!1.41e-12!238;UBERON:0009142!1.41e-12!238;UBERON:0002619!8.04e-12!22;UBERON:0000490!1.55e-11!138;UBERON:0002100!9.17e-11!216;UBERON:0001950!9.69e-11!20;UBERON:0002385!1.32e-10!63;UBERON:0001015!1.32e-10!63;UBERON:0000383!1.32e-10!63;UBERON:0001134!2.08e-10!61;UBERON:0002036!2.08e-10!61;UBERON:0003082!2.08e-10!61;UBERON:0000956!3.98e-10!25;UBERON:0000203!3.98e-10!25;UBERON:0000914!4.18e-10!83;UBERON:0002329!4.18e-10!83;UBERON:0003077!4.18e-10!83;UBERON:0003059!4.18e-10!83;UBERON:0007282!4.18e-10!83;UBERON:0009618!4.18e-10!83;UBERON:0007285!4.18e-10!83;UBERON:0003914!4.40e-10!118;UBERON:0004290!1.08e-09!70;UBERON:0000479!4.12e-08!787;UBERON:0004876!5.71e-08!20;UBERON:0003076!9.21e-08!15;UBERON:0003057!9.21e-08!15;UBERON:0003103!1.37e-07!69;UBERON:0000486!1.46e-07!82;UBERON:0006555!2.05e-07!17;UBERON:0005103!2.05e-07!17;UBERON:0000083!2.05e-07!17;UBERON:0009201!2.05e-07!17;UBERON:0004819!2.05e-07!17;UBERON:0006553!2.05e-07!17;UBERON:0003074!2.05e-07!17;UBERON:0003060!2.05e-07!17;UBERON:0000080!3.37e-07!18;UBERON:0002120!3.37e-07!18;UBERON:0004875!3.37e-07!18;UBERON:0005721!3.37e-07!18;UBERON:0005754!3.37e-07!18;UBERON:0007297!3.37e-07!18;UBERON:0000058!5.45e-07!26;UBERON:0003064!5.65e-07!37;UBERON:0004211!5.78e-07!16;UBERON:0001285!5.78e-07!16;UBERON:0007684!5.78e-07!16;UBERON:0003220!5.78e-07!16;UBERON:0004208!5.78e-07!16;UBERON:0004732!8.41e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.95e-13;41!UBERON:0001890;2.95e-13;41!UBERON:0000073;4.18e-13;53!UBERON:0002616;4.18e-13;53!UBERON:0001893;6.00e-13;34!UBERON:0003528;8.45e-13;34!UBERON:0002020;8.45e-13;34!UBERON:0002791;1.60e-12;32!UBERON:0001869;1.77e-12;32!UBERON:0002619;7.61e-12;22!UBERON:0000955;8.68e-12;68!UBERON:0001017;1.13e-11;75!UBERON:0001950;9.28e-11;20!UBERON:0000956;4.15e-10;25!UBERON:0000203;4.15e-10;25!UBERON:0001016;1.81e-09;83!UBERON:0001134;2.39e-07;16!UBERON:0002036;2.39e-07;16!UBERON:0011216;7.82e-07;132!UBERON:0004732;8.27e-07;13 | |||
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| ||
|short_description=p1@BIN1 | |short_description=p1@BIN1 | ||
}} | }} |
Latest revision as of 20:06, 16 September 2015
Short description: | p1@BIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BIN1_5end |
Coexpression cluster: | C3182_skeletal_diaphragm_Pericytes_tongue_optic_corpus_Skeletal |
Association with transcript: | -31bp_to_ENST00000376113_5end |
EntrezGene: | BIN1 |
HGNC: | 1052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.54e-10 | 121 |
muscle precursor cell | 7.99e-09 | 58 |
myoblast | 7.99e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.99e-09 | 58 |
muscle cell | 2.83e-08 | 55 |