FFCP PHASE1:Hg19::chr6:166581938..166581955,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11515 | |||
|TSSclassifier=strong | |||
|UniProt=O15178 | |||
|association_with_transcript=151bp_to_ENST00000296946_5end | |||
|cluster_id=chr6:166581938..166581955,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_3_at_T_5end | |||
|id=chr6:166581938..166581955,- | |||
|ontology_enrichment_celltype=CL:0000946!5.53e-17!1;CL:0000786!5.53e-17!1;CL:0000980!5.53e-17!1;CL:0000167!1.41e-16!1;CL:0000164!1.41e-16!1;CL:0000502!1.41e-16!1;CL:0000172!1.41e-16!1;CL:0000173!1.41e-16!1;CL:0002351!1.41e-16!1;CL:0000785!3.71e-09!2;CL:0000955!3.71e-09!2;CL:0000818!3.71e-09!2;CL:0000954!3.71e-09!2;CL:0000816!3.71e-09!2;CL:0000242!4.02e-09!2;CL:1000415!6.94e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000946;3.34e-66;1!CL:0000786;3.34e-66;1!CL:0000123;5.96e-34;2!CL:0000242;5.96e-34;2!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000362;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.39e-66,1;CL:0000786,2.39e-66,1;CL:0000980,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000242,7.05e-34,2;CL:0000817,3.27e-23,3;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000362,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000954;5.96e-34;2!CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease=DOID:630!7.57e-17!1;DOID:0050177!7.57e-17!1;DOID:0050427!7.57e-17!1;DOID:4430!1.41e-16!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;2.62e-23;3!DOID:3908;1.40e-14;5!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,2.62e-23,3;DOID:3908,1.40e-14,5;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.63e-16!1;UBERON:0001961!2.63e-16!1;UBERON:0001744!2.63e-16!1;UBERON:0001735!2.63e-16!1;UBERON:0002581!3.07e-16!1;UBERON:0000007!4.70e-09!2;UBERON:0002360!6.42e-09!2;UBERON:0000094!6.42e-09!2;UBERON:0007645!6.42e-09!2;UBERON:0001954!7.49e-09!2;UBERON:0003022!7.49e-09!2;UBERON:0002421!7.49e-09!2;UBERON:0002600!7.49e-09!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,17.2115845759531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,1.95897778844825,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p3@T | |||
}} |
Latest revision as of 20:04, 16 September 2015
Short description: | p3@T |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_T_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 151bp_to_ENST00000296946_5end |
EntrezGene: | T |
HGNC: | 11515 |
UniProt: | O15178 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.39e-66 | 1 |
plasma cell | 2.39e-66 | 1 |
plasmablast | 2.39e-66 | 1 |
mature B cell | 5.04e-34 | 2 |
pre-B-II cell | 5.04e-34 | 2 |
transitional stage B cell | 5.04e-34 | 2 |
small pre-B-II cell | 5.04e-34 | 2 |
immature B cell | 5.04e-34 | 2 |
Merkel cell | 7.05e-34 | 2 |
precursor B cell | 3.27e-23 | 3 |
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.62e-23 | 3 |
non-small cell lung carcinoma | 1.40e-14 | 5 |
lung carcinoma | 1.04e-08 | 9 |