FFCP PHASE1:Hg19::chr16:50059183..50059199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255919 | |EntrezGene=255919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26759 | |HGNC=26759 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9A8 | |UniProt=Q8N9A8 | ||
|association_with_transcript=0bp_to_NM_153261,uc002eft.2,uc002efu.2,uc002efv.2_5end | |association_with_transcript=0bp_to_NM_153261,uc002eft.2,uc002efu.2,uc002efv.2_5end | ||
|cluster_id=chr16:50059183..50059199,+ | |||
|coexpression_cluster_id=C299 | |coexpression_cluster_id=C299 | ||
|description=CAGE_peak_2_at_TMEM188_5end | |description=CAGE_peak_2_at_TMEM188_5end | ||
|id=chr16:50059183..50059199,+ | |id=chr16:50059183..50059199,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.58e-25!76;CL:0000557!1.76e-23!71;CL:0000839!8.64e-23!70;CL:0000763!3.80e-21!112;CL:0000049!3.80e-21!112;CL:0002009!6.16e-21!65;CL:0000738!7.81e-21!140;CL:0002031!3.18e-20!124;CL:0002032!5.58e-20!165;CL:0000837!5.58e-20!165;CL:0000037!6.65e-20!172;CL:0000566!6.65e-20!172;CL:0002194!8.81e-20!63;CL:0000576!8.81e-20!63;CL:0000040!8.81e-20!63;CL:0000559!8.81e-20!63;CL:0000988!3.84e-19!182;CL:0002087!9.58e-18!119;CL:0002057!1.54e-16!42;CL:0000860!7.11e-15!45;CL:0000134!3.63e-09!358;CL:0002320!1.73e-08!365;CL:0000219!1.19e-07!390;CL:0000048!3.13e-07!430 | |ontology_enrichment_celltype=CL:0000766!1.58e-25!76;CL:0000557!1.76e-23!71;CL:0000839!8.64e-23!70;CL:0000763!3.80e-21!112;CL:0000049!3.80e-21!112;CL:0002009!6.16e-21!65;CL:0000738!7.81e-21!140;CL:0002031!3.18e-20!124;CL:0002032!5.58e-20!165;CL:0000837!5.58e-20!165;CL:0000037!6.65e-20!172;CL:0000566!6.65e-20!172;CL:0002194!8.81e-20!63;CL:0000576!8.81e-20!63;CL:0000040!8.81e-20!63;CL:0000559!8.81e-20!63;CL:0000988!3.84e-19!182;CL:0002087!9.58e-18!119;CL:0002057!1.54e-16!42;CL:0000860!7.11e-15!45;CL:0000134!3.63e-09!358;CL:0002320!1.73e-08!365;CL:0000219!1.19e-07!390;CL:0000048!3.13e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000766;2.91e-17;69!CL:0000473;1.44e-16;39!CL:0000234;1.44e-16;39!CL:0000576;3.59e-16;48!CL:0000860;1.82e-14;33!CL:0002057;1.82e-14;33!CL:0000763;2.94e-08;100!CL:0000081;4.81e-08;11!CL:0000738;1.63e-07;136!CL:0000235;3.89e-07;6!CL:0000094;4.01e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.04e-41,72;CL:0000557,4.73e-37,67;CL:0000839,5.30e-36,66;CL:0002009,2.92e-34,61;CL:0002194,1.71e-32,59;CL:0000576,1.71e-32,59;CL:0000040,1.71e-32,59;CL:0000559,1.71e-32,59;CL:0000763,1.87e-30,108;CL:0000049,1.87e-30,108;CL:0000738,4.72e-30,136;CL:0000473,4.15e-29,48;CL:0000234,4.15e-29,48;CL:0002031,2.31e-27,120;CL:0000037,1.67e-26,168;CL:0000988,6.96e-26,177;CL:0002032,2.40e-25,161;CL:0000837,2.40e-25,161;CL:0002087,3.27e-24,115;CL:0000860,1.13e-23,42;CL:0002057,1.13e-23,42;CL:0000134,7.36e-12,354;CL:0002320,7.13e-11,361;CL:0000219,2.35e-09,386;CL:0000048,3.04e-09,427;CL:0002393,5.41e-09,9;CL:0002397,5.41e-09,9;CL:0000723,1.46e-08,433;CL:0000034,4.81e-08,441;CL:0000081,1.52e-07,11;CL:0000235,4.12e-07,6;CL:0000094,4.82e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-16;42!CL:0000049;1.95e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.75e-26!102;UBERON:0003061!5.75e-26!102;UBERON:0002193!5.51e-25!112;UBERON:0002371!2.84e-20!80;UBERON:0001474!5.20e-18!86;UBERON:0002405!3.13e-17!115;UBERON:0004765!2.35e-14!101;UBERON:0001434!2.35e-14!101;UBERON:0003081!1.83e-11!216;UBERON:0002384!3.39e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!5.75e-26!102;UBERON:0003061!5.75e-26!102;UBERON:0002193!5.51e-25!112;UBERON:0002371!2.84e-20!80;UBERON:0001474!5.20e-18!86;UBERON:0002405!3.13e-17!115;UBERON:0004765!2.35e-14!101;UBERON:0001434!2.35e-14!101;UBERON:0003081!1.83e-11!216;UBERON:0002384!3.39e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.39e-08;15!UBERON:0000179;5.39e-08;15!UBERON:0000463;5.39e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.90e-39,98;UBERON:0003061,2.90e-39,98;UBERON:0002193,4.33e-37,108;UBERON:0002371,2.35e-33,76;UBERON:0001474,3.13e-30,82;UBERON:0002405,5.70e-30,93;UBERON:0004765,2.03e-27,90;UBERON:0001434,7.37e-24,100;UBERON:0003081,5.97e-18,203;UBERON:0002384,1.20e-10,371;UBERON:0002204,2.03e-10,167;UBERON:0000178,7.35e-08,15;UBERON:0000179,7.35e-08,15;UBERON:0000463,7.35e-08,15;UBERON:0000926,9.42e-08,315;UBERON:0004120,9.42e-08,315;UBERON:0006603,9.42e-08,315 | |||
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| ||
|short_description=p2@TMEM188 | |short_description=p2@TMEM188 | ||
}} | }} |
Latest revision as of 20:04, 16 September 2015
Short description: | p2@TMEM188 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM188_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_NM_153261, uc002eft.2, uc002efu.2, uc002efv.2_5end |
EntrezGene: | TMEM188 |
HGNC: | 26759 |
UniProt: | Q8N9A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.90e-39 | 98 |
blood island | 2.90e-39 | 98 |
hemolymphoid system | 4.33e-37 | 108 |
bone marrow | 2.35e-33 | 76 |
bone element | 3.13e-30 | 82 |
immune system | 5.70e-30 | 93 |
skeletal element | 2.03e-27 | 90 |
skeletal system | 7.37e-24 | 100 |
lateral plate mesoderm | 5.97e-18 | 203 |
connective tissue | 1.20e-10 | 371 |
musculoskeletal system | 2.03e-10 | 167 |
blood | 7.35e-08 | 15 |
haemolymphatic fluid | 7.35e-08 | 15 |
organism substance | 7.35e-08 | 15 |
mesoderm | 9.42e-08 | 315 |
mesoderm-derived structure | 9.42e-08 | 315 |
presumptive mesoderm | 9.42e-08 | 315 |