FFCP PHASE1:Hg19::chr8:142167523..142167532,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:142167523..142167532,+
|short_description=p10@DENND3
|description=CAGE_peak_10_at_DENND3_5end
|association_with_transcript=29bp_to_ENST00000520482,uc003yvz...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22898 | |EntrezGene=22898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29134 | |HGNC=29134 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000520482,uc003yvz.1_5end | |||
|cluster_id=chr8:142167523..142167532,+ | |||
|coexpression_cluster_id=C1439 | |||
|description=CAGE_peak_10_at_DENND3_5end | |||
|id=chr8:142167523..142167532,+ | |||
|ontology_enrichment_celltype=CL:0001014!5.64e-07!2;CL:0001016!5.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.70e-36;2!CL:0001016;1.70e-36;2!CL:0000214;2.34e-25;3!CL:0000453;2.90e-15;5!CL:0000840;6.90e-13;5!CL:0000153;4.09e-09;9!CL:0000447;4.09e-09;9!CL:0000990;6.61e-09;8!CL:0000451;1.90e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.04e-36,2;CL:0001016,2.04e-36,2;CL:0000214,2.34e-25,3;CL:0000453,3.12e-15,5;CL:0000840,7.33e-13,5;CL:0001029,7.33e-13,5;CL:0000153,4.09e-09,9;CL:0000447,4.09e-09,9;CL:0000990,6.88e-09,8;CL:0000451,1.96e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.88e-19;1!UBERON:0003056;2.32e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!2.31e-09!5;UBERON:0000982!2.31e-09!5;UBERON:0004770!2.31e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.34e-25;3!UBERON:0007616;2.34e-25;3!UBERON:0002217;2.34e-25;3!UBERON:0002018;2.34e-25;3!UBERON:0007195;1.18e-19;1!UBERON:0002171;1.18e-19;1!UBERON:0006518;1.18e-19;1!UBERON:0008949;1.18e-19;1!UBERON:0000101;1.18e-19;1!UBERON:0002167;1.18e-19;1!UBERON:0000941;1.88e-19;1!UBERON:0001785;1.88e-19;1!UBERON:0002464;1.88e-19;1!UBERON:0004904;1.88e-19;1!UBERON:0001021;1.88e-19;1!UBERON:0003714;2.07e-10;2!UBERON:0005162;2.07e-10;2!UBERON:0000122;2.07e-10;2!UBERON:0004905;3.85e-10;8!UBERON:0000982;3.85e-10;8!UBERON:0004770;3.85e-10;8!UBERON:0004457;4.09e-09;9!UBERON:0000042;4.09e-09;9!UBERON:0000486;4.71e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.34e-25,3;UBERON:0007616,2.34e-25,3;UBERON:0002217,2.34e-25,3;UBERON:0002018,2.34e-25,3;UBERON:0002171,1.08e-19,1;UBERON:0006518,1.08e-19,1;UBERON:0008949,1.08e-19,1;UBERON:0000101,1.08e-19,1;UBERON:0002167,1.08e-19,1;UBERON:0007195,1.30e-19,1;UBERON:0000941,1.88e-19,1;UBERON:0001785,1.88e-19,1;UBERON:0002464,1.88e-19,1;UBERON:0004904,1.88e-19,1;UBERON:0001021,1.88e-19,1;UBERON:0003902,1.88e-19,1;UBERON:0005425,1.88e-19,1;UBERON:0003714,2.07e-10,2;UBERON:0005162,2.07e-10,2;UBERON:0000122,2.07e-10,2;UBERON:0004905,3.85e-10,8;UBERON:0000982,3.85e-10,8;UBERON:0004770,3.85e-10,8;UBERON:0004457,4.71e-07,12;UBERON:0000042,4.71e-07,12 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,9.07762831779956,3.95153871551882,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.640724475406168,1.72924735609633,4.97086866416635,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.426909383510862,0,0,0,0,0,0,0,0 | ||
|short_description=p10@DENND3 | |||
}} | }} |
Latest revision as of 20:02, 16 September 2015
Short description: | p10@DENND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DENND3_5end |
Coexpression cluster: | C1439_Synoviocyte_Fibroblast_heart_mesenchymal_Chondrocyte_Hep2_Myoblast |
Association with transcript: | 29bp_to_ENST00000520482, uc003yvz.1_5end |
EntrezGene: | DENND3 |
HGNC: | 29134 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.04e-36 | 2 |
immature CD1a-positive Langerhans cell | 2.04e-36 | 2 |
synovial cell | 2.34e-25 | 3 |
Langerhans cell | 3.12e-15 | 5 |
immature conventional dendritic cell | 7.33e-13 | 5 |
common dendritic progenitor | 7.33e-13 | 5 |
GAG secreting cell | 4.09e-09 | 9 |
carbohydrate secreting cell | 4.09e-09 | 9 |
conventional dendritic cell | 6.88e-09 | 8 |
dendritic cell | 1.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.34e-25 | 3 |
layer of synovial tissue | 2.34e-25 | 3 |
synovial joint | 2.34e-25 | 3 |
synovial membrane of synovial joint | 2.34e-25 | 3 |
lower lobe of right lung | 1.08e-19 | 1 |
right lung lobe | 1.08e-19 | 1 |
lower lobe of lung | 1.08e-19 | 1 |
lobe of lung | 1.08e-19 | 1 |
right lung | 1.08e-19 | 1 |
stroma of bone marrow | 1.30e-19 | 1 |
cranial nerve II | 1.88e-19 | 1 |
cranial nerve | 1.88e-19 | 1 |
nerve trunk | 1.88e-19 | 1 |
nerve connecting eye with brain | 1.88e-19 | 1 |
nerve | 1.88e-19 | 1 |
retinal neural layer | 1.88e-19 | 1 |
presumptive neural retina | 1.88e-19 | 1 |
neural tissue | 2.07e-10 | 2 |
multi cell component structure | 2.07e-10 | 2 |
neuron projection bundle | 2.07e-10 | 2 |
articulation | 3.85e-10 | 8 |
skeletal joint | 3.85e-10 | 8 |
articular system | 3.85e-10 | 8 |
cavity lining | 4.71e-07 | 12 |
serous membrane | 4.71e-07 | 12 |