FFCP PHASE1:Hg19::chr19:19569270..19569277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54815 | |EntrezGene=54815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29989 | |HGNC=29989 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YP4 | |UniProt=Q86YP4 | ||
|association_with_transcript=0bp_to_ENST00000358713_5end | |association_with_transcript=0bp_to_ENST00000358713_5end | ||
|cluster_id=chr19:19569270..19569277,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_32_at_GATAD2A_5end | |description=CAGE_peak_32_at_GATAD2A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000147!8.27e-32!14;CL:0000148!1.33e-25!10;CL:0000541!1.33e-25!10;CL:0000149!1.14e-16!4;CL:0000710!1.51e-12!20;CL:0000325!1.09e-10!39;CL:0002567!1.34e-10!3;CL:0002586!1.78e-10!3;CL:0000075!3.79e-09!27;CL:0002566!1.13e-08!1;CL:0002127!5.43e-08!1;CL:0000914!5.43e-08!1;CL:0000911!5.43e-08!1;CL:0000814!5.43e-08!1;CL:0002042!5.43e-08!1;CL:0002039!5.43e-08!1;CL:0002040!5.43e-08!1;CL:0002041!5.43e-08!1;CL:0002077!2.22e-07!33 | |ontology_enrichment_celltype=CL:0000147!8.27e-32!14;CL:0000148!1.33e-25!10;CL:0000541!1.33e-25!10;CL:0000149!1.14e-16!4;CL:0000710!1.51e-12!20;CL:0000325!1.09e-10!39;CL:0002567!1.34e-10!3;CL:0002586!1.78e-10!3;CL:0000075!3.79e-09!27;CL:0002566!1.13e-08!1;CL:0002127!5.43e-08!1;CL:0000914!5.43e-08!1;CL:0000911!5.43e-08!1;CL:0000814!5.43e-08!1;CL:0002042!5.43e-08!1;CL:0002039!5.43e-08!1;CL:0002040!5.43e-08!1;CL:0002041!5.43e-08!1;CL:0002077!2.22e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.78e-79;10!CL:0000147;9.12e-57;14!CL:0002566;5.12e-50;1!CL:0000710;4.28e-40;20!CL:0000075;5.44e-30;27!CL:0002077;1.30e-20;34!CL:0002567;6.76e-18;3!CL:0000150;7.91e-07;9 | |ontology_enrichment_celltype_v019=CL:0000148;5.78e-79;10!CL:0000147;9.12e-57;14!CL:0002566;5.12e-50;1!CL:0000710;4.28e-40;20!CL:0000075;5.44e-30;27!CL:0002077;1.30e-20;34!CL:0002567;6.76e-18;3!CL:0000150;7.91e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.79e-79,10;CL:0000541,5.79e-79,10;CL:0000147,9.13e-57,14;CL:0002566,3.99e-50,1;CL:0000710,4.28e-40,20;CL:0000075,5.44e-30,27;CL:0002077,4.91e-24,34;CL:0000333,3.24e-19,41;CL:0002567,6.76e-18,3;CL:0000133,7.99e-14,59;CL:0000221,1.50e-11,72;CL:0000150,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000133;1.25e-07;59!CL:0000221;2.78e-07;72 | |ontology_enrichment_development_v019=CL:0000133;1.25e-07;59!CL:0000221;2.78e-07;72 | ||
|ontology_enrichment_disease=DOID:1909!5.15e-15!2 | |ontology_enrichment_disease=DOID:1909!5.15e-15!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!3.57e-13!5;UBERON:0005388!3.57e-13!5;UBERON:0001802!3.57e-13!5;UBERON:0001781!1.78e-10!3;UBERON:0001782!1.78e-10!3;UBERON:0005424!1.78e-10!3 | |ontology_enrichment_uberon=UBERON:0000966!3.57e-13!5;UBERON:0005388!3.57e-13!5;UBERON:0001802!3.57e-13!5;UBERON:0001781!1.78e-10!3;UBERON:0001782!1.78e-10!3;UBERON:0005424!1.78e-10!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p32@GATAD2A | |short_description=p32@GATAD2A | ||
}} | }} |
Latest revision as of 20:00, 16 September 2015
Short description: | p32@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_GATAD2A_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_ENST00000358713_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | Q86YP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.79e-79 | 10 |
melanoblast | 5.79e-79 | 10 |
pigment cell | 9.13e-57 | 14 |
dark melanocyte | 3.99e-50 | 1 |
neurecto-epithelial cell | 4.28e-40 | 20 |
columnar/cuboidal epithelial cell | 5.44e-30 | 27 |
ecto-epithelial cell | 4.91e-24 | 34 |
migratory neural crest cell | 3.24e-19 | 41 |
light melanocyte | 6.76e-18 | 3 |
neurectodermal cell | 7.99e-14 | 59 |
ectodermal cell | 1.50e-11 | 72 |
glandular epithelial cell | 7.91e-07 | 9 |