FFCP PHASE1:Hg19::chr10:123886537..123886542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=308bp_to_ENST00000369000,uc001lfy.2_5end | |association_with_transcript=308bp_to_ENST00000369000,uc001lfy.2_5end | ||
|cluster_id=chr10:123886537..123886542,+ | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_6_at_TACC2_5end | |description=CAGE_peak_6_at_TACC2_5end | ||
|id=chr10:123886537..123886542,+ | |id=chr10:123886537..123886542,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.52e-19!254;CL:0002076!1.99e-10!43;CL:0000223!9.99e-09!59 | |ontology_enrichment_celltype=CL:0000066!4.52e-19!254;CL:0002076!1.99e-10!43;CL:0000223!9.99e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000575;6.54e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,5.84e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.09e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.36e-19!106;DOID:0050687!1.08e-14!143;DOID:162!9.91e-09!235;DOID:14566!3.50e-08!239 | |ontology_enrichment_disease=DOID:305!1.36e-19!106;DOID:0050687!1.08e-14!143;DOID:162!9.91e-09!235;DOID:14566!3.50e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!4.81e-13!53;UBERON:0004119!1.50e-12!169;UBERON:0000925!1.50e-12!169;UBERON:0006595!1.50e-12!169;UBERON:0001007!1.08e-11!155;UBERON:0001555!1.08e-11!155;UBERON:0007026!1.08e-11!155;UBERON:0004921!9.66e-11!129;UBERON:0004185!9.66e-11!129;UBERON:0001004!2.18e-10!72;UBERON:0008947!2.35e-10!38;UBERON:0003258!2.35e-10!38;UBERON:0001737!8.09e-10!9;UBERON:0000077!8.62e-10!130;UBERON:0005157!1.57e-09!51;UBERON:0001048!2.69e-09!168;UBERON:0000063!1.03e-08!97;UBERON:0000481!3.57e-08!347;UBERON:0001557!5.89e-08!19;UBERON:0003104!8.58e-08!238;UBERON:0009142!8.58e-08!238;UBERON:0000072!9.09e-08!46;UBERON:0005153!2.77e-07!37;UBERON:0001041!7.58e-07!98 | |ontology_enrichment_uberon=UBERON:0000065!4.81e-13!53;UBERON:0004119!1.50e-12!169;UBERON:0000925!1.50e-12!169;UBERON:0006595!1.50e-12!169;UBERON:0001007!1.08e-11!155;UBERON:0001555!1.08e-11!155;UBERON:0007026!1.08e-11!155;UBERON:0004921!9.66e-11!129;UBERON:0004185!9.66e-11!129;UBERON:0001004!2.18e-10!72;UBERON:0008947!2.35e-10!38;UBERON:0003258!2.35e-10!38;UBERON:0001737!8.09e-10!9;UBERON:0000077!8.62e-10!130;UBERON:0005157!1.57e-09!51;UBERON:0001048!2.69e-09!168;UBERON:0000063!1.03e-08!97;UBERON:0000481!3.57e-08!347;UBERON:0001557!5.89e-08!19;UBERON:0003104!8.58e-08!238;UBERON:0009142!8.58e-08!238;UBERON:0000072!9.09e-08!46;UBERON:0005153!2.77e-07!37;UBERON:0001041!7.58e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.08e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.40e-10,2;UBERON:0004921,1.49e-07,118;UBERON:0004119,4.54e-07,160;UBERON:0000925,4.54e-07,160;UBERON:0006595,4.54e-07,160;UBERON:0000065,7.57e-07,54 | |||
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| ||
|short_description=p6@TACC2 | |short_description=p6@TACC2 | ||
}} | }} |
Latest revision as of 19:54, 16 September 2015
Short description: | p6@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TACC2_5end |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | 308bp_to_ENST00000369000, uc001lfy.2_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.84e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.40e-10 | 2 |
subdivision of digestive tract | 1.49e-07 | 118 |
endoderm-derived structure | 4.54e-07 | 160 |
endoderm | 4.54e-07 | 160 |
presumptive endoderm | 4.54e-07 | 160 |
respiratory tract | 7.57e-07 | 54 |