FFCP PHASE1:Hg19::chr9:16575389..16575395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |EntrezGene=54796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30988 | |HGNC=30988 | ||
|TSSclassifier=strong | |||
|UniProt=B4E3J2 | |UniProt=B4E3J2 | ||
|association_with_transcript=-35bp_to_ENST00000544198,uc011lmv.1_5end | |association_with_transcript=-35bp_to_ENST00000544198,uc011lmv.1_5end | ||
|cluster_id=chr9:16575389..16575395,- | |||
|coexpression_cluster_id=C233 | |coexpression_cluster_id=C233 | ||
|description=CAGE_peak_49_at_BNC2_5end | |description=CAGE_peak_49_at_BNC2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.72e-21;10 | |ontology_enrichment_development_v019=UBERON:0005795;7.72e-21;10 | ||
|ontology_enrichment_disease=DOID:0060084!6.78e-08!3;DOID:127!6.78e-08!3 | |ontology_enrichment_disease=DOID:0060084!6.78e-08!3;DOID:127!6.78e-08!3 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006834!1.53e-21!1;UBERON:0000998!3.45e-21!1;UBERON:0006868!3.45e-21!1;UBERON:0005795!5.98e-15!22;UBERON:0004175!3.55e-13!25;UBERON:0003133!1.64e-10!48;UBERON:0000995!3.08e-09!21;UBERON:0003134!5.46e-09!37;UBERON:0000474!5.46e-09!37;UBERON:0003975!7.61e-09!22;UBERON:0005156!1.44e-08!59;UBERON:0000990!1.44e-08!59;UBERON:0003100!3.84e-08!41;UBERON:0006947!5.93e-08!3;UBERON:0004054!5.93e-08!3;UBERON:0002110!7.76e-08!3;UBERON:0006242!7.76e-08!3 | |ontology_enrichment_uberon=UBERON:0006834!1.53e-21!1;UBERON:0000998!3.45e-21!1;UBERON:0006868!3.45e-21!1;UBERON:0005795!5.98e-15!22;UBERON:0004175!3.55e-13!25;UBERON:0003133!1.64e-10!48;UBERON:0000995!3.08e-09!21;UBERON:0003134!5.46e-09!37;UBERON:0000474!5.46e-09!37;UBERON:0003975!7.61e-09!22;UBERON:0005156!1.44e-08!59;UBERON:0000990!1.44e-08!59;UBERON:0003100!3.84e-08!41;UBERON:0006947!5.93e-08!3;UBERON:0004054!5.93e-08!3;UBERON:0002110!7.76e-08!3;UBERON:0006242!7.76e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.46e-50;1!UBERON:0005795;3.99e-50;1!UBERON:0000995;9.73e-13;17!UBERON:0003975;4.31e-12;18!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0004175;1.61e-10;21!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0006834;1.46e-50;1!UBERON:0005795;3.99e-50;1!UBERON:0000995;9.73e-13;17!UBERON:0003975;4.31e-12;18!UBERON:0002050;3.26e-11;5!UBERON:0005423;3.26e-11;5!UBERON:0004175;1.61e-10;21!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.46e-50,1;UBERON:0005795,3.99e-21,22;UBERON:0000995,1.53e-10,21;UBERON:0003975,4.14e-10,22;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0004175,5.06e-09,25 | |||
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|short_description=p49@BNC2 | |short_description=p49@BNC2 | ||
}} | }} |
Latest revision as of 19:53, 16 September 2015
Short description: | p49@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_BNC2_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | -35bp_to_ENST00000544198, uc011lmv.1_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | B4E3J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.46e-50 | 1 |
embryonic uterus | 3.99e-21 | 22 |
uterus | 1.53e-10 | 21 |
internal female genitalia | 4.14e-10 | 22 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
internal genitalia | 5.06e-09 | 25 |