FFCP PHASE1:Hg19::chr10:123872391..123872432,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_ENST00000493951_5end | |association_with_transcript=-112bp_to_ENST00000493951_5end | ||
|cluster_id=chr10:123872391..123872432,+ | |||
|description=CAGE_peak_2_at_TACC2_5end | |description=CAGE_peak_2_at_TACC2_5end | ||
|id=chr10:123872391..123872432,+ | |id=chr10:123872391..123872432,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.61e-23!254;CL:0000223!1.95e-11!59;CL:0000220!3.30e-11!246;CL:0002321!3.63e-11!248;CL:0002076!2.32e-09!43 | |ontology_enrichment_celltype=CL:0000066!1.61e-23!254;CL:0000223!1.95e-11!59;CL:0000220!3.30e-11!246;CL:0002321!3.63e-11!248;CL:0002076!2.32e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.72e-08;42 | |ontology_enrichment_celltype_v019=CL:0002076;5.72e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.88e-20,253;CL:0000223,1.23e-12,58;CL:0002076,4.01e-10,42;CL:0002321,5.64e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000223;5.01e-07;58 | |ontology_enrichment_development_v019=CL:0000223;5.01e-07;58 | ||
|ontology_enrichment_disease=DOID:305!5.26e-11!106;DOID:0050687!6.96e-10!143;DOID:7!1.47e-08!39 | |ontology_enrichment_disease=DOID:305!5.26e-11!106;DOID:0050687!6.96e-10!143;DOID:7!1.47e-08!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.74e-09,106;DOID:0050687,6.76e-08,143;DOID:7,9.72e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.33e-17!169;UBERON:0000925!2.33e-17!169;UBERON:0006595!2.33e-17!169;UBERON:0000481!6.22e-17!347;UBERON:0003104!1.90e-16!238;UBERON:0009142!1.90e-16!238;UBERON:0001007!3.47e-16!155;UBERON:0001555!3.47e-16!155;UBERON:0007026!3.47e-16!155;UBERON:0004921!2.29e-13!129;UBERON:0004185!2.29e-13!129;UBERON:0002100!3.11e-13!216;UBERON:0000119!4.34e-13!312;UBERON:0000483!2.05e-12!309;UBERON:0005177!4.31e-12!107;UBERON:0000077!4.87e-12!130;UBERON:0001048!5.74e-12!168;UBERON:0000468!3.05e-11!659;UBERON:0000475!5.88e-11!365;UBERON:0003914!6.82e-11!118;UBERON:0000466!1.73e-10!126;UBERON:0000467!4.64e-10!625;UBERON:0000477!4.99e-10!286;UBERON:0005157!7.68e-10!51;UBERON:0000480!8.04e-10!626;UBERON:0004111!4.03e-09!241;UBERON:0001041!1.00e-08!98;UBERON:0005911!1.80e-08!82;UBERON:0009569!1.94e-08!113;UBERON:0005153!2.64e-08!37;UBERON:0000464!2.99e-08!104;UBERON:0000490!6.30e-08!138;UBERON:0003103!7.14e-08!69;UBERON:0005256!3.97e-07!143;UBERON:0000922!5.36e-07!612;UBERON:0001008!8.89e-07!45 | |ontology_enrichment_uberon=UBERON:0004119!2.33e-17!169;UBERON:0000925!2.33e-17!169;UBERON:0006595!2.33e-17!169;UBERON:0000481!6.22e-17!347;UBERON:0003104!1.90e-16!238;UBERON:0009142!1.90e-16!238;UBERON:0001007!3.47e-16!155;UBERON:0001555!3.47e-16!155;UBERON:0007026!3.47e-16!155;UBERON:0004921!2.29e-13!129;UBERON:0004185!2.29e-13!129;UBERON:0002100!3.11e-13!216;UBERON:0000119!4.34e-13!312;UBERON:0000483!2.05e-12!309;UBERON:0005177!4.31e-12!107;UBERON:0000077!4.87e-12!130;UBERON:0001048!5.74e-12!168;UBERON:0000468!3.05e-11!659;UBERON:0000475!5.88e-11!365;UBERON:0003914!6.82e-11!118;UBERON:0000466!1.73e-10!126;UBERON:0000467!4.64e-10!625;UBERON:0000477!4.99e-10!286;UBERON:0005157!7.68e-10!51;UBERON:0000480!8.04e-10!626;UBERON:0004111!4.03e-09!241;UBERON:0001041!1.00e-08!98;UBERON:0005911!1.80e-08!82;UBERON:0009569!1.94e-08!113;UBERON:0005153!2.64e-08!37;UBERON:0000464!2.99e-08!104;UBERON:0000490!6.30e-08!138;UBERON:0003103!7.14e-08!69;UBERON:0005256!3.97e-07!143;UBERON:0000922!5.36e-07!612;UBERON:0001008!8.89e-07!45 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.19e-13,160;UBERON:0000925,1.19e-13,160;UBERON:0006595,1.19e-13,160;UBERON:0001007,3.45e-13,145;UBERON:0001555,3.45e-13,145;UBERON:0007026,3.45e-13,145;UBERON:0005177,9.93e-12,101;UBERON:0002100,1.94e-11,199;UBERON:0004921,8.35e-11,118;UBERON:0003914,9.91e-11,117;UBERON:0000119,1.79e-09,309;UBERON:0005157,4.23e-09,47;UBERON:0001048,4.28e-09,160;UBERON:0000483,7.00e-09,306;UBERON:0005153,5.37e-08,37;UBERON:0005911,6.92e-08,82;UBERON:0003103,7.08e-08,68;UBERON:0004111,9.14e-08,240;UBERON:0003104,5.57e-07,160;UBERON:0009142,5.57e-07,160;UBERON:0009569,9.57e-07,112 | |||
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| ||
|short_description=p2@TACC2 | |short_description=p2@TACC2 | ||
}} | }} |
Latest revision as of 19:51, 16 September 2015
Short description: | p2@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TACC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_ENST00000493951_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.88e-20 | 253 |
endodermal cell | 1.23e-12 | 58 |
endo-epithelial cell | 4.01e-10 | 42 |
embryonic cell | 5.64e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.19e-13 | 160 |
endoderm | 1.19e-13 | 160 |
presumptive endoderm | 1.19e-13 | 160 |
digestive system | 3.45e-13 | 145 |
digestive tract | 3.45e-13 | 145 |
primitive gut | 3.45e-13 | 145 |
trunk region element | 9.93e-12 | 101 |
trunk | 1.94e-11 | 199 |
subdivision of digestive tract | 8.35e-11 | 118 |
epithelial tube | 9.91e-11 | 117 |
cell layer | 1.79e-09 | 309 |
epithelial fold | 4.23e-09 | 47 |
primordium | 4.28e-09 | 160 |
epithelium | 7.00e-09 | 306 |
epithelial bud | 5.37e-08 | 37 |
endo-epithelium | 6.92e-08 | 82 |
compound organ | 7.08e-08 | 68 |
anatomical conduit | 9.14e-08 | 240 |
mesenchyme | 5.57e-07 | 160 |
entire embryonic mesenchyme | 5.57e-07 | 160 |
subdivision of trunk | 9.57e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.74e-09 | 106 |
cell type cancer | 6.76e-08 | 143 |
disease of anatomical entity | 9.72e-08 | 39 |