FFCP PHASE1:Hg19::chr4:174460524..174460526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79804 | |EntrezGene=79804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=474bp_to_DQ831955,DQ831956_5end | |association_with_transcript=474bp_to_DQ831955,DQ831956_5end | ||
|cluster_id=chr4:174460524..174460526,+ | |||
|description=CAGE_peak_2_at_NBLA00301_5end | |description=CAGE_peak_2_at_NBLA00301_5end | ||
|id=chr4:174460524..174460526,+ | |id=chr4:174460524..174460526,+ | ||
|ontology_enrichment_celltype=CL:0002195!2.72e-11!2;CL:0002571!2.72e-11!2;CL:0002617!2.14e-10!2;CL:0002620!7.86e-07!23 | |ontology_enrichment_celltype=CL:0002195!2.72e-11!2;CL:0002571!2.72e-11!2;CL:0002617!2.14e-10!2;CL:0002620!7.86e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.86e-53;5!CL:0002195;5.04e-34;2!CL:0002571;5.04e-34;2!CL:0002321;1.13e-18;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.05e-34,2;CL:0002571,7.05e-34,2;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.01e-15!5;DOID:450!3.01e-15!5;DOID:66!3.01e-15!5;DOID:423!3.01e-15!5;DOID:0080000!3.01e-15!5;DOID:11722!3.01e-15!5;DOID:0060084!1.26e-07!3;DOID:127!1.26e-07!3 | |ontology_enrichment_disease=DOID:17!3.01e-15!5;DOID:450!3.01e-15!5;DOID:66!3.01e-15!5;DOID:423!3.01e-15!5;DOID:0080000!3.01e-15!5;DOID:11722!3.01e-15!5;DOID:0060084!1.26e-07!3;DOID:127!1.26e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:169;1.22e-44;6!DOID:171;2.38e-27;10!DOID:3095;4.01e-13;22!DOID:2994;4.01e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.76e-45,6;DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001723!2.06e-07!3;UBERON:0001033!2.06e-07!3;UBERON:0010056!2.06e-07!3 | |ontology_enrichment_uberon=UBERON:0001723!2.06e-07!3;UBERON:0001033!2.06e-07!3;UBERON:0010056!2.06e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.86e-53;5!UBERON:0002410;2.86e-53;5!UBERON:0000010;3.09e-30;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.19e-53,5;UBERON:0002410,2.19e-53,5;UBERON:0000010,2.66e-30,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94084660514027,0,1.41972529649618,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94084660514027,0,1.41972529649618,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p2@NBLA00301 | |short_description=p2@NBLA00301 | ||
}} | }} |
Latest revision as of 19:42, 16 September 2015
Short description: | p2@NBLA00301 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NBLA00301_5end |
Coexpression cluster: | NA |
Association with transcript: | 474bp_to_DQ831955, DQ831956_5end |
EntrezGene: | NBLA00301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.05e-34 | 2 |
hepatic mesenchymal stem cell | 7.05e-34 | 2 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.19e-53 | 5 |
autonomic nervous system | 2.19e-53 | 5 |
peripheral nervous system | 2.66e-30 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.76e-45 | 6 |
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |