FFCP PHASE1:Hg19::chr11:132813186..132813201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4978 | |EntrezGene=4978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8143 | |HGNC=8143 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0Y0,Q14982,Q7Z3W6 | |UniProt=A8K0Y0,Q14982,Q7Z3W6 | ||
|association_with_transcript=-149bp_to_NM_002545,uc001qgs.2,uc001qgt.2,uc010sck.1_5end | |association_with_transcript=-149bp_to_NM_002545,uc001qgs.2,uc001qgt.2,uc010sck.1_5end | ||
|cluster_id=chr11:132813186..132813201,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_18_at_OPCML_5end | |description=CAGE_peak_18_at_OPCML_5end | ||
|id=chr11:132813186..132813201,- | |id=chr11:132813186..132813201,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.61e-40!94;UBERON:0001016!3.61e-40!94;UBERON:0005743!8.71e-40!86;UBERON:0001017!3.32e-39!82;UBERON:0000955!9.03e-36!69;UBERON:0006238!9.03e-36!69;UBERON:0001049!2.18e-35!57;UBERON:0005068!2.18e-35!57;UBERON:0006241!2.18e-35!57;UBERON:0007135!2.18e-35!57;UBERON:0002616!5.41e-34!59;UBERON:0002346!3.09e-28!90;UBERON:0003075!1.17e-27!86;UBERON:0007284!1.17e-27!86;UBERON:0007023!1.64e-24!115;UBERON:0002780!1.75e-22!41;UBERON:0001890!1.75e-22!41;UBERON:0006240!1.75e-22!41;UBERON:0003080!7.31e-22!42;UBERON:0001893!2.47e-21!34;UBERON:0002020!3.80e-21!34;UBERON:0003528!3.80e-21!34;UBERON:0001950!2.58e-20!20;UBERON:0001869!9.04e-20!32;UBERON:0000924!1.22e-19!173;UBERON:0006601!1.22e-19!173;UBERON:0004733!2.01e-19!12;UBERON:0002028!2.01e-19!12;UBERON:0007277!2.01e-19!12;UBERON:0002791!4.65e-19!33;UBERON:0004121!6.12e-19!169;UBERON:0000956!6.74e-19!25;UBERON:0000203!6.74e-19!25;UBERON:0000033!7.79e-19!123;UBERON:0002619!2.44e-18!22;UBERON:0004732!7.98e-18!13;UBERON:0000153!1.21e-17!129;UBERON:0007811!1.21e-17!129;UBERON:0003056!8.23e-16!61;UBERON:0003076!2.90e-15!15;UBERON:0003057!2.90e-15!15;UBERON:0002680!4.65e-15!9;UBERON:0001895!4.65e-15!9;UBERON:0010092!4.65e-15!9;UBERON:0002021!1.23e-12!5;UBERON:0000988!2.26e-11!3;UBERON:0002298!2.51e-11!8;UBERON:0000025!2.11e-09!194;UBERON:0001897!8.64e-09!2;UBERON:0002148!2.70e-08!2;UBERON:0009662!2.70e-08!2;UBERON:0002360!4.71e-08!2;UBERON:0000094!4.71e-08!2;UBERON:0007645!4.71e-08!2;UBERON:0002037!7.65e-07!6;UBERON:0006215!7.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0004733;8.61e-38;12!UBERON:0002028;8.61e-38;12!UBERON:0004732;5.63e-35;13!UBERON:0000955;1.49e-10;68!UBERON:0001016;4.14e-09;83!UBERON:0001017;8.48e-08;75!UBERON:0000073;7.86e-07;53!UBERON:0002616;7.86e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56 | |||
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| ||
|short_description=p18@OPCML | |short_description=p18@OPCML | ||
}} | }} |
Latest revision as of 19:36, 16 September 2015
Short description: | p18@OPCML |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_OPCML_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -149bp_to_NM_002545, uc001qgs.2, uc001qgt.2, uc010sck.1_5end |
EntrezGene: | OPCML |
HGNC: | 8143 |
UniProt: | A8K0Y0Q14982Q7Z3W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |