FFCP PHASE1:Hg19::chr10:123734683..123734738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25935 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXX6 | |||
|association_with_transcript=0bp_to_ENST00000369017,ENST00000369023,ENST00000489266,uc001lfs.2,uc001lft.2,uc001lfu.1,uc009xzv.2_5end | |||
|cluster_id=chr10:123734683..123734738,- | |||
|description=CAGE_peak_1_at_NSMCE4A_5end | |||
|id=chr10:123734683..123734738,- | |||
|ontology_enrichment_celltype=CL:0000542!1.35e-25!53;CL:0000051!1.35e-25!53;CL:0000838!5.60e-25!52;CL:0000945!2.32e-15!24;CL:0000826!2.32e-15!24;CL:0000037!2.99e-15!172;CL:0000566!2.99e-15!172;CL:0002032!2.82e-13!165;CL:0000837!2.82e-13!165;CL:0000988!2.87e-13!182;CL:0000084!1.37e-10!25;CL:0000827!1.37e-10!25;CL:0000236!2.96e-10!14;CL:0002087!3.18e-10!119;CL:0000791!3.60e-09!18;CL:0000789!3.60e-09!18;CL:0002420!3.60e-09!18;CL:0002419!3.60e-09!18;CL:0000790!3.60e-09!18;CL:0000738!8.10e-09!140;CL:0002031!1.40e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.24e-15;53!CL:0000945;2.25e-15;24!CL:0000084;1.30e-10;25!CL:0000236;1.08e-09;13!CL:0000791;3.44e-09;18!CL:0000789;3.44e-09;18!CL:0002419;3.44e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.35e-25,53;CL:0000051,1.35e-25,53;CL:0000838,5.60e-25,52;CL:0000945,2.32e-15,24;CL:0000826,2.32e-15,24;CL:0000037,4.82e-15,168;CL:0002032,4.49e-13,161;CL:0000837,4.49e-13,161;CL:0000988,7.82e-13,177;CL:0000084,1.37e-10,25;CL:0000827,1.37e-10,25;CL:0000236,2.96e-10,14;CL:0002087,4.70e-10,115;CL:0000791,3.60e-09,18;CL:0000789,3.60e-09,18;CL:0002420,3.60e-09,18;CL:0002419,3.60e-09,18;CL:0000790,3.60e-09,18;CL:0000738,1.25e-08,136;CL:0002031,2.12e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.24e-15;53!CL:0000790;3.44e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!9.10e-15!51;DOID:0060083!9.10e-15!51;DOID:1240!1.80e-11!39;DOID:8692!1.31e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.11e-09;51!DOID:0060083;3.11e-09;51!DOID:1240;6.07e-09;39!DOID:8692;2.98e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.10e-15,51;DOID:0060083,9.10e-15,51;DOID:1240,1.80e-11,39;DOID:8692,1.31e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@NSMCE4A | |||
}} |
Latest revision as of 19:33, 16 September 2015
Short description: | p1@NSMCE4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NSMCE4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369017, ENST00000369023, ENST00000489266, uc001lfs.2, uc001lft.2, uc001lfu.1, uc009xzv.2_5end |
EntrezGene: | NSMCE4A |
HGNC: | 25935 |
UniProt: | Q9NXX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.35e-25 | 53 |
common lymphoid progenitor | 1.35e-25 | 53 |
lymphoid lineage restricted progenitor cell | 5.60e-25 | 52 |
lymphocyte of B lineage | 2.32e-15 | 24 |
pro-B cell | 2.32e-15 | 24 |
hematopoietic stem cell | 4.82e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.49e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-13 | 161 |
hematopoietic cell | 7.82e-13 | 177 |
T cell | 1.37e-10 | 25 |
pro-T cell | 1.37e-10 | 25 |
B cell | 2.96e-10 | 14 |
nongranular leukocyte | 4.70e-10 | 115 |
mature alpha-beta T cell | 3.60e-09 | 18 |
alpha-beta T cell | 3.60e-09 | 18 |
immature T cell | 3.60e-09 | 18 |
mature T cell | 3.60e-09 | 18 |
immature alpha-beta T cell | 3.60e-09 | 18 |
leukocyte | 1.25e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.12e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.10e-15 | 51 |
immune system cancer | 9.10e-15 | 51 |
leukemia | 1.80e-11 | 39 |
myeloid leukemia | 1.31e-08 | 31 |