FFCP PHASE1:Hg19::chr8:141728679..141728690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5747 | |EntrezGene=5747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9611 | |HGNC=9611 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWJ1 | |UniProt=B4DWJ1 | ||
|association_with_transcript=142bp_to_ENST00000430260_5end | |association_with_transcript=142bp_to_ENST00000430260_5end | ||
|cluster_id=chr8:141728679..141728690,- | |||
|description=CAGE_peak_28_at_PTK2_5end | |description=CAGE_peak_28_at_PTK2_5end | ||
|id=chr8:141728679..141728690,- | |id=chr8:141728679..141728690,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.60e-13;3!CL:0000222;2.53e-11;1!CL:0000244;8.22e-11;4!CL:0000731;8.22e-11;4!CL:0002569;3.35e-07;6 | |ontology_enrichment_celltype_v019=CL:0002621;1.60e-13;3!CL:0000222;2.53e-11;1!CL:0000244;8.22e-11;4!CL:0000731;8.22e-11;4!CL:0002569;3.35e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.19e-13,3;CL:0000244,7.84e-11,4;CL:0000731,7.84e-11,4;CL:0002569,2.78e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.25e-10;4!UBERON:0007284;2.25e-10;4 | |ontology_enrichment_development_v019=UBERON:0005062;2.25e-10;4!UBERON:0007284;2.25e-10;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-25!115 | |ontology_enrichment_uberon=UBERON:0007023!1.76e-25!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.60e-13;3!UBERON:0000946;1.60e-13;3!UBERON:0001949;1.60e-13;3!UBERON:0000486;4.51e-13;12!UBERON:0006834;9.04e-11;1!UBERON:0001000;9.04e-11;1!UBERON:0002146;9.04e-11;1!UBERON:0002134;9.04e-11;1!UBERON:0005208;9.04e-11;1!UBERON:0005623;9.04e-11;1!UBERON:0004145;9.04e-11;1!UBERON:0005946;9.04e-11;1!UBERON:0005352;9.04e-11;1!UBERON:0005965;9.04e-11;1!UBERON:0002078;9.04e-11;1!UBERON:0000365;8.02e-09;5!UBERON:0005910;1.72e-07;6!UBERON:0003422;3.35e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003978;1.60e-13;3!UBERON:0000946;1.60e-13;3!UBERON:0001949;1.60e-13;3!UBERON:0000486;4.51e-13;12!UBERON:0006834;9.04e-11;1!UBERON:0001000;9.04e-11;1!UBERON:0002146;9.04e-11;1!UBERON:0002134;9.04e-11;1!UBERON:0005208;9.04e-11;1!UBERON:0005623;9.04e-11;1!UBERON:0004145;9.04e-11;1!UBERON:0005946;9.04e-11;1!UBERON:0005352;9.04e-11;1!UBERON:0005965;9.04e-11;1!UBERON:0002078;9.04e-11;1!UBERON:0000365;8.02e-09;5!UBERON:0005910;1.72e-07;6!UBERON:0003422;3.35e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.32e-13,3;UBERON:0009751,1.32e-13,3;UBERON:0000946,1.32e-13,3;UBERON:0002523,1.32e-13,3;UBERON:0005983,1.32e-13,3;UBERON:0002165,1.32e-13,3;UBERON:0002062,1.32e-13,3;UBERON:0007280,1.32e-13,3;UBERON:0001949,2.19e-13,3;UBERON:0002134,5.57e-11,1;UBERON:0005208,5.57e-11,1;UBERON:0005946,5.57e-11,1;UBERON:0005965,5.57e-11,1;UBERON:0002078,5.57e-11,1;UBERON:0001000,7.46e-11,1;UBERON:0005352,7.46e-11,1;UBERON:0002146,1.10e-10,1;UBERON:0005623,1.10e-10,1;UBERON:0006834,1.21e-10,1;UBERON:0000365,7.72e-09,5;UBERON:0005910,1.67e-07,6;UBERON:0003422,2.78e-07,6 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,0.434539556882471,0,0.486634870302636,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0.744467425326359,0,0,0.252433774244115,0,0,0.355009592516614,0,0.169560592310488,1.15956511897978,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.01578553838631,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,1.02341449813341,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0.7133421029625,0,0.844430541190656,0,0,0,0.288666338176536,0,0,0.188287601553558,0.43050537267123,0,2.21715076768338,4.36474460393223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.19548792950642,0,0,0,0,0.311039587661807,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,1.09692698576986,0,0.139423744278603,1.00035336054936,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0,0,1.18375320854817,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,1.14580212005842,1.43574604915363,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.640724475406168,0.628817220398664,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0.438568099157414,0,0,0,0,3.10887307558079,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.317079050969534,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0.40781839786099,0.197318320688547,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0.207216164163037,0.6828739083758,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0,0.231522474323834,0,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.12729431655633,0.404234377916439,0.217716747896961,0.684466602170562,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,1.1001729976458,0.406896178315738,0.665756774185513,0.805095174364105,0.320568492303233 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| ||
|short_description=p28@PTK2 | |short_description=p28@PTK2 | ||
}} | }} |
Latest revision as of 19:31, 16 September 2015
Short description: | p28@PTK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_PTK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_ENST00000430260_5end |
EntrezGene: | PTK2 |
HGNC: | 9611 |
UniProt: | B4DWJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.19e-13 | 3 |
transitional epithelial cell | 7.84e-11 | 4 |
urothelial cell | 7.84e-11 | 4 |
mesenchymal stem cell of umbilical cord | 2.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
valve | 1.32e-13 | 3 |
cardiac mesenchyme | 1.32e-13 | 3 |
cardial valve | 1.32e-13 | 3 |
tunica intima | 1.32e-13 | 3 |
heart layer | 1.32e-13 | 3 |
endocardium | 1.32e-13 | 3 |
endocardial cushion | 1.32e-13 | 3 |
presumptive endocardium | 1.32e-13 | 3 |
gingival epithelium | 2.19e-13 | 3 |
tricuspid valve | 5.57e-11 | 1 |
right atrium valve | 5.57e-11 | 1 |
outflow tract of atrium | 5.57e-11 | 1 |
outflow part of right atrium | 5.57e-11 | 1 |
right cardiac atrium | 5.57e-11 | 1 |
vas deferens | 7.46e-11 | 1 |
spermatic cord | 7.46e-11 | 1 |
pulmonary valve | 1.10e-10 | 1 |
semi-lunar valve | 1.10e-10 | 1 |
uterus or analog | 1.21e-10 | 1 |
urothelium | 7.72e-09 | 5 |
transitional epithelium | 1.67e-07 | 6 |
mesenchyme of umbilical cord | 2.78e-07 | 6 |