FFCP PHASE1:Hg19::chr16:4897431..4897520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29855 | |EntrezGene=29855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12506 | |HGNC=12506 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPG3 | |UniProt=Q9NPG3 | ||
|association_with_transcript=-391bp_to_ENST00000262376,ENST00000545171,NM_001079514,uc002cyb.2_5end | |association_with_transcript=-391bp_to_ENST00000262376,ENST00000545171,NM_001079514,uc002cyb.2_5end | ||
|cluster_id=chr16:4897431..4897520,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_UBN1_5end | |description=CAGE_peak_1_at_UBN1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000766!6.19e-22!76;CL:0002057!1.64e-18!42;CL:0000557!3.45e-18!71;CL:0000763!3.82e-18!112;CL:0000049!3.82e-18!112;CL:0000839!4.21e-18!70;CL:0000860!7.09e-18!45;CL:0002009!4.64e-17!65;CL:0002194!4.95e-17!63;CL:0000576!4.95e-17!63;CL:0000040!4.95e-17!63;CL:0000559!4.95e-17!63;CL:0000738!1.19e-12!140;CL:0000037!3.16e-12!172;CL:0000566!3.16e-12!172;CL:0000988!8.95e-12!182;CL:0002032!2.63e-11!165;CL:0000837!2.63e-11!165;CL:0002031!8.21e-10!124;CL:0002087!2.71e-09!119 | |ontology_enrichment_celltype=CL:0000766!6.19e-22!76;CL:0002057!1.64e-18!42;CL:0000557!3.45e-18!71;CL:0000763!3.82e-18!112;CL:0000049!3.82e-18!112;CL:0000839!4.21e-18!70;CL:0000860!7.09e-18!45;CL:0002009!4.64e-17!65;CL:0002194!4.95e-17!63;CL:0000576!4.95e-17!63;CL:0000040!4.95e-17!63;CL:0000559!4.95e-17!63;CL:0000738!1.19e-12!140;CL:0000037!3.16e-12!172;CL:0000566!3.16e-12!172;CL:0000988!8.95e-12!182;CL:0002032!2.63e-11!165;CL:0000837!2.63e-11!165;CL:0002031!8.21e-10!124;CL:0002087!2.71e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.41e-16;33!CL:0002057;8.41e-16;33!CL:0000576;2.66e-12;48!CL:0000473;6.35e-12;39!CL:0000234;6.35e-12;39!CL:0000766;8.21e-10;69 | |ontology_enrichment_celltype_v019=CL:0000860;8.41e-16;33!CL:0002057;8.41e-16;33!CL:0000576;2.66e-12;48!CL:0000473;6.35e-12;39!CL:0000234;6.35e-12;39!CL:0000766;8.21e-10;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.33e-23,72;CL:0000557,2.54e-19,67;CL:0000839,3.02e-19,66;CL:0000763,7.32e-19,108;CL:0000049,7.32e-19,108;CL:0000860,1.64e-18,42;CL:0002057,1.64e-18,42;CL:0002194,3.14e-18,59;CL:0000576,3.14e-18,59;CL:0000040,3.14e-18,59;CL:0000559,3.14e-18,59;CL:0002009,3.19e-18,61;CL:0000473,1.75e-16,48;CL:0000234,1.75e-16,48;CL:0000738,4.63e-13,136;CL:0000037,1.49e-12,168;CL:0000988,8.60e-12,177;CL:0002032,1.27e-11,161;CL:0000837,1.27e-11,161;CL:0002031,3.55e-10,120;CL:0002087,1.18e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;9.94e-14;42 | |ontology_enrichment_development_v019=CL:0002057;9.94e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-19!102;UBERON:0003061!2.21e-19!102;UBERON:0002193!3.77e-19!112;UBERON:0002405!4.50e-15!115;UBERON:0002371!1.53e-14!80;UBERON:0001474!1.56e-14!86;UBERON:0003081!2.23e-10!216;UBERON:0004765!7.90e-09!101;UBERON:0001434!7.90e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!2.21e-19!102;UBERON:0003061!2.21e-19!102;UBERON:0002193!3.77e-19!112;UBERON:0002405!4.50e-15!115;UBERON:0002371!1.53e-14!80;UBERON:0001474!1.56e-14!86;UBERON:0003081!2.23e-10!216;UBERON:0004765!7.90e-09!101;UBERON:0001434!7.90e-09!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.20e-20,98;UBERON:0003061,3.20e-20,98;UBERON:0002193,6.65e-20,108;UBERON:0002405,4.69e-16,93;UBERON:0002371,2.37e-15,76;UBERON:0001474,2.76e-15,82;UBERON:0003081,5.15e-11,203;UBERON:0004765,1.07e-10,90;UBERON:0001434,2.98e-08,100 | |||
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| ||
|short_description=p1@UBN1 | |short_description=p1@UBN1 | ||
}} | }} |
Latest revision as of 19:31, 16 September 2015
Short description: | p1@UBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBN1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -391bp_to_ENST00000262376, ENST00000545171, NM_001079514, uc002cyb.2_5end |
EntrezGene: | UBN1 |
HGNC: | 12506 |
UniProt: | Q9NPG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.33e-23 | 72 |
granulocyte monocyte progenitor cell | 2.54e-19 | 67 |
myeloid lineage restricted progenitor cell | 3.02e-19 | 66 |
myeloid cell | 7.32e-19 | 108 |
common myeloid progenitor | 7.32e-19 | 108 |
classical monocyte | 1.64e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-18 | 42 |
monopoietic cell | 3.14e-18 | 59 |
monocyte | 3.14e-18 | 59 |
monoblast | 3.14e-18 | 59 |
promonocyte | 3.14e-18 | 59 |
macrophage dendritic cell progenitor | 3.19e-18 | 61 |
defensive cell | 1.75e-16 | 48 |
phagocyte | 1.75e-16 | 48 |
leukocyte | 4.63e-13 | 136 |
hematopoietic stem cell | 1.49e-12 | 168 |
hematopoietic cell | 8.60e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.55e-10 | 120 |
nongranular leukocyte | 1.18e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.20e-20 | 98 |
blood island | 3.20e-20 | 98 |
hemolymphoid system | 6.65e-20 | 108 |
immune system | 4.69e-16 | 93 |
bone marrow | 2.37e-15 | 76 |
bone element | 2.76e-15 | 82 |
lateral plate mesoderm | 5.15e-11 | 203 |
skeletal element | 1.07e-10 | 90 |
skeletal system | 2.98e-08 | 100 |