FFCP PHASE1:Hg19::chr16:4896659..4896674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29855 | |EntrezGene=29855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12506 | |HGNC=12506 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010uxw.1_5end | |association_with_transcript=0bp_to_uc010uxw.1_5end | ||
|cluster_id=chr16:4896659..4896674,+ | |||
|description=CAGE_peak_3_at_UBN1_5end | |description=CAGE_peak_3_at_UBN1_5end | ||
|id=chr16:4896659..4896674,+ | |id=chr16:4896659..4896674,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.30e-22!42;CL:0000766!4.89e-22!76;CL:0000557!2.66e-21!71;CL:0000860!4.29e-21!45;CL:0002009!6.97e-20!65;CL:0000839!1.01e-19!70;CL:0002194!1.28e-18!63;CL:0000576!1.28e-18!63;CL:0000040!1.28e-18!63;CL:0000559!1.28e-18!63;CL:0000763!3.77e-17!112;CL:0000049!3.77e-17!112;CL:0000738!8.25e-17!140;CL:0000037!9.83e-15!172;CL:0000566!9.83e-15!172;CL:0000012!2.27e-14!682;CL:0000988!2.93e-14!182;CL:0000063!3.39e-14!578;CL:0002031!4.67e-14!124;CL:0000003!2.96e-13!722;CL:0000548!4.83e-13!679;CL:0000004!4.83e-13!679;CL:0000255!4.83e-13!679;CL:0002032!5.86e-13!165;CL:0000837!5.86e-13!165;CL:0002087!1.06e-12!119;CL:0000134!1.53e-09!358;CL:0002320!2.48e-09!365;CL:0000144!1.99e-08!625;CL:0000034!3.37e-08!444;CL:0000048!3.63e-08!430;CL:0002393!1.28e-07!9;CL:0002397!1.28e-07!9;CL:0000723!2.41e-07!436;CL:0000219!3.62e-07!390;CL:0002371!5.06e-07!591 | |ontology_enrichment_celltype=CL:0002057!2.30e-22!42;CL:0000766!4.89e-22!76;CL:0000557!2.66e-21!71;CL:0000860!4.29e-21!45;CL:0002009!6.97e-20!65;CL:0000839!1.01e-19!70;CL:0002194!1.28e-18!63;CL:0000576!1.28e-18!63;CL:0000040!1.28e-18!63;CL:0000559!1.28e-18!63;CL:0000763!3.77e-17!112;CL:0000049!3.77e-17!112;CL:0000738!8.25e-17!140;CL:0000037!9.83e-15!172;CL:0000566!9.83e-15!172;CL:0000012!2.27e-14!682;CL:0000988!2.93e-14!182;CL:0000063!3.39e-14!578;CL:0002031!4.67e-14!124;CL:0000003!2.96e-13!722;CL:0000548!4.83e-13!679;CL:0000004!4.83e-13!679;CL:0000255!4.83e-13!679;CL:0002032!5.86e-13!165;CL:0000837!5.86e-13!165;CL:0002087!1.06e-12!119;CL:0000134!1.53e-09!358;CL:0002320!2.48e-09!365;CL:0000144!1.99e-08!625;CL:0000034!3.37e-08!444;CL:0000048!3.63e-08!430;CL:0002393!1.28e-07!9;CL:0002397!1.28e-07!9;CL:0000723!2.41e-07!436;CL:0000219!3.62e-07!390;CL:0002371!5.06e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.95e-27;33!CL:0002057;4.95e-27;33!CL:0000576;3.47e-24;48!CL:0000473;2.47e-18;39!CL:0000234;2.47e-18;39!CL:0000766;4.77e-18;69!CL:0002393;2.94e-10;6!CL:0002397;2.94e-10;6!CL:0000763;2.26e-09;100!CL:0002087;1.59e-08;104!CL:0000738;2.49e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.41e-42,42;CL:0002057,1.41e-42,42;CL:0000766,1.02e-38,72;CL:0000557,1.96e-38,67;CL:0000473,1.66e-37,48;CL:0000234,1.66e-37,48;CL:0002009,3.59e-35,61;CL:0000839,7.49e-35,66;CL:0000738,1.84e-34,136;CL:0002194,1.67e-32,59;CL:0000576,1.67e-32,59;CL:0000040,1.67e-32,59;CL:0000559,1.67e-32,59;CL:0000037,1.15e-30,168;CL:0000763,5.58e-30,108;CL:0000049,5.58e-30,108;CL:0000988,5.95e-29,177;CL:0002031,1.41e-28,120;CL:0002032,2.97e-26,161;CL:0000837,2.97e-26,161;CL:0002087,3.28e-26,115;CL:0002393,8.26e-15,9;CL:0002397,8.26e-15,9;CL:0000134,2.63e-14,354;CL:0002320,1.58e-13,361;CL:0000219,2.35e-11,386;CL:0000034,3.99e-11,441;CL:0000048,9.51e-11,427;CL:0000723,3.08e-10,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.71e-31;42!CL:0000049;1.61e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.51e-19!80;UBERON:0001474!5.64e-19!86;UBERON:0002390!1.60e-15!102;UBERON:0003061!1.60e-15!102;UBERON:0002405!9.04e-15!115;UBERON:0002193!2.24e-14!112;UBERON:0004765!3.18e-13!101;UBERON:0001434!3.18e-13!101;UBERON:0002384!2.33e-08!375;UBERON:0003081!3.32e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.37e-37,76;UBERON:0001474,5.26e-33,82;UBERON:0002390,6.34e-32,98;UBERON:0003061,6.34e-32,98;UBERON:0002405,1.05e-28,93;UBERON:0004765,1.30e-28,90;UBERON:0002193,2.54e-27,108;UBERON:0001434,3.85e-24,100;UBERON:0003081,7.74e-19,203;UBERON:0002204,6.65e-13,167;UBERON:0002384,1.78e-12,371;UBERON:0000926,1.08e-08,315;UBERON:0004120,1.08e-08,315;UBERON:0006603,1.08e-08,315 | |||
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|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,0,0.893922188854576,1.74467704820074,0,0,1.30592814099919,0,0.697801167972428,0.873765488520689,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0.152826811495903,0.0821005894499457,0.157421562627358,1.57345710739562,3.0706351847777,4.95411594611443,0.919421224478927,0,0,0,0.142169232487422,1.46800219667424,3.87796785972314,2.00544447470142,3.25516306073778,0.223915474239924,0,0.257575567634187,1.30858414901608,3.40088349319928,2.42584061187816,1.85943229524548,2.05583944010913,1.23882548358041,2.58923153089935,2.30544635876191,1.6553756092201,1.72372840368309,0,2.70852973188684,2.07066573496865,1.91034305040492,1.79778787556068,1.83650335422542,1.28371610830437,0.639337125799041,0.989553900560148,2.99195486432448,0.852449501065388,1.45104619314292,1.13477044938228,2.4912889959823,1.50749199154046,1.0429658368404,2.82345498116652,1.21079900526674,2.20966581592539,2.53169909952708,6.33765858935825,6.59073329891635,5.2414661377094,4.6054738770063,2.4028302854641,2.57160938715328,13.1105862120974,9.15016715115815,6.57590953552682,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,3.96513985737078,1.68152568894461,1.84368859342554,2.9506465517075,1.57204305099666,4.31763147898969,0.167186495390678,0.651844533267181,0.946895611469467,1.94826728407911,0.891283655081389,0.589211814949674,0.886135578334485,1.35401931882508,0.384273959177026,0.130059347559878,0,0.552700035571697,0,1.18629250529648,0.267540828089713,0,0.453237370790265,4.21542542962113,2.40539211837841,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,0,0,0,5.24177532384304,5.08136371988664,2.89648807765598,0,0,0,0.361439152384566,0.50133791063589,0,0.795285947051099,1.45990461090791,0.0945348171640679,0,0,0.261958150995425,0,0.370784442784429,0.97364218096405,1.39303789839414,0.930705723632056,1.90792499444274,4.0039643754609,1.11437250398869,0.79504962946682,0,0,1.69592382577203,1.25849830862972,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,4.5994991239765,0.949265659568129,0.732806975721629,3.9534125230819,7.75560528296651,0,0.496971951695318,0.12663051166458,2.1185468930115,1.72101972449288,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0,0,0.151357427644931,0,0.234321431833797,0,1.1409436430889,0.597794722207204,0,0.323745888736263,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0.213557388818567,0.423863802319124,0.600182192168805,0.206105058476878,1.28820270022815,0.37223371266318,1.18143432568886,0.292311015483596,0.757301322732344,0.368199594569197,0,0.710019185033229,0.705264687593482,0.508681776931463,0.57978255948989,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,3.12899064659632,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,1.21348177344148,0.392442930250692,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.329250856225877,0,0,0,0.325808305310325,0,0,0,0.70445216541493,0.577465791044295,0.925971025153221,0.380508304469197,1.58040879591855,2.57545848628462,0,0,0.445893486866185,0,0.16798212819886,0,0.53735113621709,0.290633938513962,0.383382679165211,0,0.352193736052904,7.67114027500857,3.31475892859011,5.6809095041871,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.775630294546667,7.15312891703765,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,1.2162378064119,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.716243852959582,0.560425719967636,7.29013812747131,4.31255149719035,6.28880877770767,0.76228387266739,1.30139853857622,0.773288812777695,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0.260650843404249,0.391602314925481,0.343143423810856,2.27444828735176,1.94142780736755,1.49418580924822,3.94065842880137,0,1.5119514666484,0.744323423456331,1.99500565274481,0,0.384417447767103,0.511707249066704,0.804269605718038,0,0,0.532685175939381,0.492762936082855,0,0.697262270759755,1.81289174387433,0.40101294060657,0.276242966807689,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0.510281115829547,0.431831832204279,1.54227252690289,0,0,0.509752546090077,0,0,0.219259876645935,1.0457418040996,0,0,0,0,0.457847324091717,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.661139661443912,0.192190067365106,0.765676274967505,0.708104465988849,0.464845549297286,1.5740617341532,0,0.616067160352178,0,2.60979897622522,0,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0.8558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| ||
|short_description=p3@UBN1 | |short_description=p3@UBN1 | ||
}} | }} |
Latest revision as of 19:29, 16 September 2015
Short description: | p3@UBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010uxw.1_5end |
EntrezGene: | UBN1 |
HGNC: | 12506 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.41e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-42 | 42 |
myeloid leukocyte | 1.02e-38 | 72 |
granulocyte monocyte progenitor cell | 1.96e-38 | 67 |
defensive cell | 1.66e-37 | 48 |
phagocyte | 1.66e-37 | 48 |
macrophage dendritic cell progenitor | 3.59e-35 | 61 |
myeloid lineage restricted progenitor cell | 7.49e-35 | 66 |
leukocyte | 1.84e-34 | 136 |
monopoietic cell | 1.67e-32 | 59 |
monocyte | 1.67e-32 | 59 |
monoblast | 1.67e-32 | 59 |
promonocyte | 1.67e-32 | 59 |
hematopoietic stem cell | 1.15e-30 | 168 |
myeloid cell | 5.58e-30 | 108 |
common myeloid progenitor | 5.58e-30 | 108 |
hematopoietic cell | 5.95e-29 | 177 |
hematopoietic lineage restricted progenitor cell | 1.41e-28 | 120 |
hematopoietic oligopotent progenitor cell | 2.97e-26 | 161 |
hematopoietic multipotent progenitor cell | 2.97e-26 | 161 |
nongranular leukocyte | 3.28e-26 | 115 |
intermediate monocyte | 8.26e-15 | 9 |
CD14-positive, CD16-positive monocyte | 8.26e-15 | 9 |
mesenchymal cell | 2.63e-14 | 354 |
connective tissue cell | 1.58e-13 | 361 |
motile cell | 2.35e-11 | 386 |
stem cell | 3.99e-11 | 441 |
multi fate stem cell | 9.51e-11 | 427 |
somatic stem cell | 3.08e-10 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.37e-37 | 76 |
bone element | 5.26e-33 | 82 |
hematopoietic system | 6.34e-32 | 98 |
blood island | 6.34e-32 | 98 |
immune system | 1.05e-28 | 93 |
skeletal element | 1.30e-28 | 90 |
hemolymphoid system | 2.54e-27 | 108 |
skeletal system | 3.85e-24 | 100 |
lateral plate mesoderm | 7.74e-19 | 203 |
musculoskeletal system | 6.65e-13 | 167 |
connective tissue | 1.78e-12 | 371 |
mesoderm | 1.08e-08 | 315 |
mesoderm-derived structure | 1.08e-08 | 315 |
presumptive mesoderm | 1.08e-08 | 315 |