FFCP PHASE1:Hg19::chr1:243419000..243419003,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:243419000..243419003,+ to FFCP PHASE1:Hg19::chr1:243419000..243419003,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10806 | |EntrezGene=10806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10671 | |HGNC=10671 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SQ7 | |UniProt=Q86SQ7 | ||
|association_with_transcript=-303bp_to_NM_006642_5end | |||
|cluster_id=chr1:243419000..243419003,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_8_at_SDCCAG8_5end | |||
|id=chr1:243419000..243419003,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.71e-21!140;CL:0000037!6.47e-19!172;CL:0000566!6.47e-19!172;CL:0000988!9.20e-19!182;CL:0002087!1.41e-15!119;CL:0002031!1.33e-14!124;CL:0002032!1.65e-13!165;CL:0000837!1.65e-13!165;CL:0000838!3.49e-10!52;CL:0002393!5.09e-10!9;CL:0002397!5.09e-10!9;CL:0000542!6.94e-10!53;CL:0000051!6.94e-10!53;CL:0002057!1.55e-08!42;CL:0000860!1.12e-07!45;CL:0000784!1.80e-07!3;CL:0000080!2.05e-07!6;CL:0000767!4.40e-07!3;CL:0000623!4.76e-07!3;CL:0000825!4.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;6.33e-25;3!CL:0000767;1.59e-23;3!CL:0000623;2.25e-23;3!CL:0000451;5.37e-18;10!CL:0001014;1.42e-16;2!CL:0001016;1.42e-16;2!CL:0002393;1.80e-12;6!CL:0002397;1.80e-12;6!CL:0000840;2.10e-12;5!CL:0000094;3.56e-09;8!CL:0000037;3.72e-09;1!CL:0001024;3.72e-09;1!CL:0000990;1.97e-08;8!CL:0000453;3.74e-07;5!CL:0000542;3.89e-07;53!CL:0000081;8.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.35e-25,3;CL:0000767,2.17e-23,3;CL:0000623,2.95e-23,3;CL:0000825,2.95e-23,3;CL:0000738,5.29e-19,136;CL:0000451,6.53e-18,10;CL:0000037,1.73e-16,168;CL:0001014,2.19e-16,2;CL:0001016,2.19e-16,2;CL:0000988,1.83e-15,177;CL:0000840,2.60e-12,5;CL:0001029,2.60e-12,5;CL:0002032,4.48e-12,161;CL:0000837,4.48e-12,161;CL:0002031,1.46e-11,120;CL:0000838,1.53e-10,52;CL:0000542,2.57e-10,53;CL:0000051,2.57e-10,53;CL:0000094,3.98e-09,8;CL:0001024,4.54e-09,1;CL:0002087,6.79e-09,115;CL:0002393,1.76e-08,9;CL:0002397,1.76e-08,9;CL:0000990,2.26e-08,8;CL:0000453,4.43e-07,5;CL:0000081,9.19e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.89e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.58e-07!102;UBERON:0003061!2.58e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@SDCCAG8 | |||
}} | }} |
Latest revision as of 19:28, 16 September 2015
Short description: | p8@SDCCAG8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SDCCAG8_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -303bp_to_NM_006642_5end |
EntrezGene: | SDCCAG8 |
HGNC: | 10671 |
UniProt: | Q86SQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.35e-25 | 3 |
basophil | 2.17e-23 | 3 |
natural killer cell | 2.95e-23 | 3 |
pro-NK cell | 2.95e-23 | 3 |
leukocyte | 5.29e-19 | 136 |
dendritic cell | 6.53e-18 | 10 |
hematopoietic stem cell | 1.73e-16 | 168 |
CD1a-positive Langerhans cell | 2.19e-16 | 2 |
immature CD1a-positive Langerhans cell | 2.19e-16 | 2 |
hematopoietic cell | 1.83e-15 | 177 |
immature conventional dendritic cell | 2.60e-12 | 5 |
common dendritic progenitor | 2.60e-12 | 5 |
hematopoietic oligopotent progenitor cell | 4.48e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.48e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.46e-11 | 120 |
lymphoid lineage restricted progenitor cell | 1.53e-10 | 52 |
lymphocyte | 2.57e-10 | 53 |
common lymphoid progenitor | 2.57e-10 | 53 |
granulocyte | 3.98e-09 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.54e-09 | 1 |
nongranular leukocyte | 6.79e-09 | 115 |
intermediate monocyte | 1.76e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.76e-08 | 9 |
conventional dendritic cell | 2.26e-08 | 8 |
Langerhans cell | 4.43e-07 | 5 |
blood cell | 9.19e-07 | 11 |