FFCP PHASE1:Hg19::chr5:167247865..167247872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57451 | |EntrezGene=57451 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29943 | |HGNC=29943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-200bp_to_ENST00000517586_5end | |association_with_transcript=-200bp_to_ENST00000517586_5end | ||
|cluster_id=chr5:167247865..167247872,+ | |||
|coexpression_cluster_id=C585 | |||
|description=CAGE_peak_23_at_ODZ2_5end | |description=CAGE_peak_23_at_ODZ2_5end | ||
|id=chr5:167247865..167247872,+ | |id=chr5:167247865..167247872,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.47e-13!43;CL:0002368!4.92e-13!13;CL:0002166!2.04e-12!3;CL:0002621!1.16e-11!3;CL:0000223!3.16e-10!59;CL:0002620!2.66e-08!23 | |ontology_enrichment_celltype=CL:0002076!2.47e-13!43;CL:0002368!4.92e-13!13;CL:0002166!2.04e-12!3;CL:0002621!1.16e-11!3;CL:0000223!3.16e-10!59;CL:0002620!2.66e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.46e-55;3!CL:0002368;2.09e-22;13!CL:0002159;4.26e-21;14!CL:0002336;1.88e-19;1!CL:0002261;1.88e-19;1!CL:0002170;1.88e-19;1!CL:0000240;5.94e-13;6!CL:0000311;5.94e-13;6!CL:0000079;5.94e-13;6!CL:0000237;5.94e-13;6!CL:0002076;2.60e-10;42!CL:0002077;9.17e-08;34!CL:0002328;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.40e-55,3;CL:0002368,2.10e-22,13;CL:0002159,3.74e-21,14;CL:0002336,1.88e-19,1;CL:0002261,1.88e-19,1;CL:0002170,1.88e-19,1;CL:0000240,5.76e-13,6;CL:0000311,5.76e-13,6;CL:0000079,5.76e-13,6;CL:0000237,5.76e-13,6;CL:0000036,5.76e-13,6;CL:0000357,5.76e-13,6;CL:0000114,5.76e-13,6;CL:0002076,8.36e-11,42;CL:0002077,6.39e-09,34;CL:0000223,7.79e-08,58;CL:0002328,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.94e-13;6!CL:0000114;5.94e-13;6 | |||
|ontology_enrichment_disease=DOID:17!9.96e-07!5;DOID:450!9.96e-07!5;DOID:66!9.96e-07!5;DOID:423!9.96e-07!5;DOID:0080000!9.96e-07!5;DOID:11722!9.96e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.16e-11!3;UBERON:0001708!2.11e-09!4;UBERON:0001704!2.11e-09!4;UBERON:0001004!8.87e-09!72;UBERON:0000065!4.57e-07!53;UBERON:0004807!7.15e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.27e-41;4!UBERON:0008895;1.27e-41;4!UBERON:0011159;1.79e-33;5!UBERON:0011137;1.25e-15;11!UBERON:0010323;1.25e-15;11!UBERON:0000075;5.99e-11;16!UBERON:0000065;1.01e-08;44!UBERON:0004815;3.06e-07;3!UBERON:0002031;3.06e-07;3!UBERON:0004765;5.92e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,9.63e-42,4;UBERON:0008895,9.63e-42,4;UBERON:0011159,1.43e-33,5;UBERON:0010188,4.10e-28,6;UBERON:0002539,4.10e-28,6;UBERON:0008816,4.10e-28,6;UBERON:0010323,1.13e-15,11;UBERON:0011137,1.86e-12,14;UBERON:0000075,5.60e-11,16;UBERON:0008814,7.96e-10,18;UBERON:0000065,2.09e-08,54;UBERON:0004815,3.16e-07,3;UBERON:0002031,3.16e-07,3 | |||
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| ||
|short_description=p23@ODZ2 | |short_description=p23@ODZ2 | ||
}} | }} |
Latest revision as of 19:25, 16 September 2015
Short description: | p23@ODZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ODZ2_5end |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | -200bp_to_ENST00000517586_5end |
EntrezGene: | ODZ2 |
HGNC: | 29943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.40e-55 | 3 |
respiratory epithelial cell | 2.10e-22 | 13 |
general ecto-epithelial cell | 3.74e-21 | 14 |
buccal mucosa cell | 1.88e-19 | 1 |
endothelial cell of viscerocranial mucosa | 1.88e-19 | 1 |
keratinized cell of the oral mucosa | 1.88e-19 | 1 |
stratified squamous epithelial cell | 5.76e-13 | 6 |
keratin accumulating cell | 5.76e-13 | 6 |
stratified epithelial cell | 5.76e-13 | 6 |
keratinizing barrier epithelial cell | 5.76e-13 | 6 |
epithelial fate stem cell | 5.76e-13 | 6 |
stratified epithelial stem cell | 5.76e-13 | 6 |
surface ectodermal cell | 5.76e-13 | 6 |
endo-epithelial cell | 8.36e-11 | 42 |
ecto-epithelial cell | 6.39e-09 | 34 |
endodermal cell | 7.79e-08 | 58 |
bronchial epithelial cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 9.63e-42 | 4 |
splanchnocranium | 9.63e-42 | 4 |
primary subdivision of cranial skeletal system | 1.43e-33 | 5 |
protuberance | 4.10e-28 | 6 |
pharyngeal arch | 4.10e-28 | 6 |
embryonic head | 4.10e-28 | 6 |
cranial skeletal system | 1.13e-15 | 11 |
axial skeletal system | 1.86e-12 | 14 |
subdivision of skeletal system | 5.60e-11 | 16 |
pharyngeal arch system | 7.96e-10 | 18 |
respiratory tract | 2.09e-08 | 54 |
lower respiratory tract epithelium | 3.16e-07 | 3 |
epithelium of bronchus | 3.16e-07 | 3 |