FFCP PHASE1:Hg19::chr11:131781256..131781281,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:131781256..131781281,+
|short_description=p11@NTM
|description=CAGE_peak_11_at_NTM_5end
|association_with_transcript=-53bp_to_ENST00000479431_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000479431_5end | |||
|cluster_id=chr11:131781256..131781281,+ | |||
|coexpression_cluster_id=C2112 | |||
|description=CAGE_peak_11_at_NTM_5end | |||
|id=chr11:131781256..131781281,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.60e-25!180;CL:0000680!6.53e-17!57;CL:0000056!6.53e-17!57;CL:0000355!6.53e-17!57;CL:0000187!1.29e-15!54;CL:0000192!2.19e-15!42;CL:0000514!2.19e-15!42;CL:0000359!1.77e-14!32;CL:0000183!5.86e-14!59;CL:0000393!9.65e-14!60;CL:0000211!9.65e-14!60;CL:0000057!9.18e-13!75;CL:0002539!4.25e-07!10;CL:0002620!7.57e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.50e-15;32!CL:0002539;2.17e-09;10!CL:0000192;5.79e-09;43!CL:0002594;8.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.51e-16,32;CL:0000192,2.94e-11,43;CL:0000514,2.94e-11,43;CL:0000680,1.43e-10,58;CL:0000056,1.43e-10,58;CL:0000355,1.43e-10,58;CL:0002539,1.06e-09,10;CL:0000187,1.53e-09,55;CL:0000393,5.91e-08,61;CL:0000211,5.91e-08,61;CL:0000057,3.57e-07,76;CL:0002594,6.94e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.79e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.23e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.17e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.38e-12,14 | |||
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| ||
|short_description=p11@NTM | |||
}} | }} |
Latest revision as of 19:06, 16 September 2015
Short description: | p11@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NTM_5end |
Coexpression cluster: | C2112_Smooth_Amniotic_mesenchymal_Myoblast_Fibroblast_Lens_cerebellum |
Association with transcript: | -53bp_to_ENST00000479431_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.51e-16 | 32 |
smooth muscle cell | 2.94e-11 | 43 |
smooth muscle myoblast | 2.94e-11 | 43 |
muscle precursor cell | 1.43e-10 | 58 |
myoblast | 1.43e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-10 | 58 |
aortic smooth muscle cell | 1.06e-09 | 10 |
muscle cell | 1.53e-09 | 55 |
electrically responsive cell | 5.91e-08 | 61 |
electrically active cell | 5.91e-08 | 61 |
fibroblast | 3.57e-07 | 76 |
smooth muscle cell of the umbilical artery | 6.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.38e-12 | 14 |