FFCP PHASE1:Hg19::chr12:120156652..120156661,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11113 | |EntrezGene=11113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1985 | |HGNC=1985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=144bp_to_ENST00000544588_5end | |association_with_transcript=144bp_to_ENST00000544588_5end | ||
|cluster_id=chr12:120156652..120156661,- | |||
|description=CAGE_peak_21_at_CIT_5end | |description=CAGE_peak_21_at_CIT_5end | ||
|id=chr12:120156652..120156661,- | |id=chr12:120156652..120156661,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;7.35e-18;3!CL:0002202;7.69e-07;9!CL:0002632;7.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.00e-18,3;CL:0002202,7.91e-07,9;CL:0002632,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.80e-11;5!UBERON:0008947;6.91e-08;29!UBERON:0001041;1.17e-07;30 | |||
|ontology_enrichment_disease=DOID:0060085!2.50e-07!1;DOID:3165!2.50e-07!1;DOID:0060121!2.50e-07!1;DOID:2438!2.50e-07!1;DOID:4418!2.50e-07!1 | |ontology_enrichment_disease=DOID:0060085!2.50e-07!1;DOID:3165!2.50e-07!1;DOID:0060121!2.50e-07!1;DOID:2438!2.50e-07!1;DOID:4418!2.50e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3910;4.90e-26;2!DOID:3908;2.80e-11;5!DOID:1325;1.96e-08;7!DOID:3904;1.96e-08;7!DOID:3905;7.69e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.56e-26,2;DOID:3908,2.94e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-13!115;UBERON:0005178!3.53e-08!34;UBERON:0002224!3.53e-08!34;UBERON:0005181!6.41e-08!35;UBERON:0002171!8.00e-08!1;UBERON:0006518!8.00e-08!1;UBERON:0008949!8.00e-08!1;UBERON:0000101!8.00e-08!1;UBERON:0002167!8.00e-08!1;UBERON:0000029!1.03e-07!1;UBERON:0001874!2.66e-07!1;UBERON:0002048!4.48e-07!22;UBERON:0000117!4.48e-07!22;UBERON:0000171!4.48e-07!22;UBERON:0000170!4.48e-07!22;UBERON:0005597!4.48e-07!22;UBERON:0000118!4.48e-07!22;UBERON:0001007!7.53e-07!155;UBERON:0001555!7.53e-07!155;UBERON:0007026!7.53e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.12e-50;1!UBERON:0006518;5.12e-50;1!UBERON:0008949;5.12e-50;1!UBERON:0000101;5.12e-50;1!UBERON:0002167;5.12e-50;1!UBERON:0004903;4.90e-26;2!UBERON:0002173;4.90e-26;2!UBERON:0002186;4.90e-26;2!UBERON:0004821;7.35e-18;3!UBERON:0007499;7.35e-18;3!UBERON:0003215;7.35e-18;3!UBERON:0010368;7.35e-18;3!UBERON:0009911;7.35e-18;3!UBERON:0002299;7.35e-18;3!UBERON:0006524;7.35e-18;3!UBERON:0008874;7.35e-18;3!UBERON:0002169;7.35e-18;3!UBERON:0004894;7.35e-18;3!UBERON:0009856;9.39e-14;4!UBERON:0002046;2.80e-11;5!UBERON:0002021;3.42e-11;5!UBERON:0002048;4.53e-10;22!UBERON:0000117;4.53e-10;22!UBERON:0000171;4.53e-10;22!UBERON:0000170;4.53e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.58e-50,1;UBERON:0006518,6.58e-50,1;UBERON:0008949,6.58e-50,1;UBERON:0000101,6.58e-50,1;UBERON:0002167,6.58e-50,1;UBERON:0004903,5.56e-26,2;UBERON:0002173,5.56e-26,2;UBERON:0002186,5.56e-26,2;UBERON:0004821,8.00e-18,3;UBERON:0003215,8.00e-18,3;UBERON:0010368,8.00e-18,3;UBERON:0009911,8.00e-18,3;UBERON:0002299,8.00e-18,3;UBERON:0006524,8.00e-18,3;UBERON:0008874,8.00e-18,3;UBERON:0002169,8.00e-18,3;UBERON:0004894,8.00e-18,3;UBERON:0002046,2.66e-11,5;UBERON:0004117,2.66e-11,5;UBERON:0007689,2.66e-11,5;UBERON:0007123,2.66e-11,5;UBERON:0003091,2.66e-11,5;UBERON:0002021,3.26e-11,5;UBERON:0002048,4.74e-10,22;UBERON:0000117,4.74e-10,22;UBERON:0000171,4.74e-10,22;UBERON:0000170,4.74e-10,22;UBERON:0005597,4.74e-10,22;UBERON:0000118,4.74e-10,22;UBERON:0005178,7.37e-07,34;UBERON:0002224,7.37e-07,34 | |||
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|short_description=p21@CIT | |short_description=p21@CIT | ||
}} | }} |
Latest revision as of 18:52, 16 September 2015
Short description: | p21@CIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CIT_5end |
Coexpression cluster: | NA |
Association with transcript: | 144bp_to_ENST00000544588_5end |
EntrezGene: | CIT |
HGNC: | 1985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.00e-18 | 3 |
epithelial cell of tracheobronchial tree | 7.91e-07 | 9 |
epithelial cell of lower respiratory tract | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.58e-50 | 1 |
right lung lobe | 6.58e-50 | 1 |
lower lobe of lung | 6.58e-50 | 1 |
lobe of lung | 6.58e-50 | 1 |
right lung | 6.58e-50 | 1 |
bronchoalveolar duct junction | 5.56e-26 | 2 |
alveolar duct | 5.56e-26 | 2 |
bronchiole | 5.56e-26 | 2 |
pulmonary alveolus epithelium | 8.00e-18 | 3 |
alveolus | 8.00e-18 | 3 |
pulmonary lobule | 8.00e-18 | 3 |
lobule | 8.00e-18 | 3 |
alveolus of lung | 8.00e-18 | 3 |
alveolar system | 8.00e-18 | 3 |
pulmonary acinus | 8.00e-18 | 3 |
alveolar sac | 8.00e-18 | 3 |
alveolar wall | 8.00e-18 | 3 |
thyroid gland | 2.66e-11 | 5 |
pharyngeal pouch | 2.66e-11 | 5 |
thyroid diverticulum | 2.66e-11 | 5 |
pharyngeal pouch 2 | 2.66e-11 | 5 |
thyroid primordium | 2.66e-11 | 5 |
occipital lobe | 3.26e-11 | 5 |
lung | 4.74e-10 | 22 |
respiratory tube | 4.74e-10 | 22 |
respiration organ | 4.74e-10 | 22 |
pair of lungs | 4.74e-10 | 22 |
lung primordium | 4.74e-10 | 22 |
lung bud | 4.74e-10 | 22 |
thoracic cavity element | 7.37e-07 | 34 |
thoracic cavity | 7.37e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.56e-26 | 2 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |