FFCP PHASE1:Hg19::chr14:95081044..95081060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=202bp_to_J05176_5end | |association_with_transcript=202bp_to_J05176_5end | ||
|cluster_id=chr14:95081044..95081060,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_SERPINA3_5end | |description=CAGE_peak_6_at_SERPINA3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.74e-11;3!CL:0000182;8.05e-11;12!CL:0002616;7.55e-09;1!CL:0000737;7.87e-09;4 | |ontology_enrichment_celltype_v019=CL:0000746;1.74e-11;3!CL:0000182;8.05e-11;12!CL:0002616;7.55e-09;1!CL:0000737;7.87e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.94e-11,3;CL:0000513,1.94e-11,3;CL:0000182,8.80e-11,12;CL:0002616,5.75e-09,1;CL:0000737,8.51e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000513;1.74e-11;3!UBERON:0006241;3.69e-11;3!UBERON:0003057;3.69e-11;3!UBERON:0010226;7.55e-09;1!UBERON:0005425;7.55e-09;1!UBERON:0004161;6.19e-07;11 | |ontology_enrichment_development_v019=CL:0000513;1.74e-11;3!UBERON:0006241;3.69e-11;3!UBERON:0003057;3.69e-11;3!UBERON:0010226;7.55e-09;1!UBERON:0005425;7.55e-09;1!UBERON:0004161;6.19e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.40e-14,19;UBERON:0006925,1.40e-14,19;UBERON:0008836,1.40e-14,19;UBERON:0008835,1.59e-12,22;UBERON:0003894,1.59e-12,22;UBERON:0009854,5.87e-12,23;UBERON:0002240,3.42e-11,3;UBERON:0005174,3.42e-11,3;UBERON:0001137,3.42e-11,3;UBERON:0007499,5.84e-11,25;UBERON:0009497,5.84e-11,25;UBERON:0000015,5.84e-11,25;UBERON:0002423,5.84e-11,25;UBERON:0006235,5.84e-11,25;UBERON:0004161,5.84e-11,25;UBERON:0009856,1.61e-10,26;UBERON:0000949,3.60e-10,45;UBERON:0000941,6.22e-09,1;UBERON:0001785,6.22e-09,1;UBERON:0002464,6.22e-09,1;UBERON:0004904,6.22e-09,1;UBERON:0001021,6.22e-09,1;UBERON:0003902,6.22e-09,1;UBERON:0005425,6.22e-09,1;UBERON:0000996,7.85e-09,1;UBERON:0002084,8.49e-09,1;UBERON:0002082,8.49e-09,1;UBERON:0010226,8.49e-09,1;UBERON:0002365,9.75e-09,31;UBERON:0002330,9.75e-09,31;UBERON:0003076,3.19e-08,15;UBERON:0003057,3.19e-08,15;UBERON:0002368,1.12e-07,35;UBERON:0005177,1.73e-07,101;UBERON:0002417,2.80e-07,60;UBERON:0000916,2.80e-07,60 | |||
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| ||
|short_description=p6@SERPINA3 | |short_description=p6@SERPINA3 | ||
}} | }} |
Latest revision as of 18:49, 16 September 2015
Short description: | p6@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 202bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.94e-11 | 3 |
cardiac muscle myoblast | 1.94e-11 | 3 |
hepatocyte | 8.80e-11 | 12 |
perirenal adipocyte cell | 5.75e-09 | 1 |
striated muscle cell | 8.51e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.40e-14 | 19 |
digestive gland | 1.40e-14 | 19 |
liver bud | 1.40e-14 | 19 |
hepatic diverticulum | 1.59e-12 | 22 |
liver primordium | 1.59e-12 | 22 |
digestive tract diverticulum | 5.87e-12 | 23 |
spinal cord | 3.42e-11 | 3 |
dorsal region element | 3.42e-11 | 3 |
dorsum | 3.42e-11 | 3 |
epithelial sac | 5.84e-11 | 25 |
epithelium of foregut-midgut junction | 5.84e-11 | 25 |
anatomical boundary | 5.84e-11 | 25 |
hepatobiliary system | 5.84e-11 | 25 |
foregut-midgut junction | 5.84e-11 | 25 |
septum transversum | 5.84e-11 | 25 |
sac | 1.61e-10 | 26 |
endocrine system | 3.60e-10 | 45 |
cranial nerve II | 6.22e-09 | 1 |
cranial nerve | 6.22e-09 | 1 |
nerve trunk | 6.22e-09 | 1 |
nerve connecting eye with brain | 6.22e-09 | 1 |
nerve | 6.22e-09 | 1 |
retinal neural layer | 6.22e-09 | 1 |
presumptive neural retina | 6.22e-09 | 1 |
vagina | 7.85e-09 | 1 |
heart left ventricle | 8.49e-09 | 1 |
cardiac ventricle | 8.49e-09 | 1 |
future cardiac ventricle | 8.49e-09 | 1 |
exocrine gland | 9.75e-09 | 31 |
exocrine system | 9.75e-09 | 31 |
posterior neural tube | 3.19e-08 | 15 |
chordal neural plate | 3.19e-08 | 15 |
endocrine gland | 1.12e-07 | 35 |
trunk region element | 1.73e-07 | 101 |
abdominal segment of trunk | 2.80e-07 | 60 |
abdomen | 2.80e-07 | 60 |