FFCP PHASE1:Hg19::chr2:28201109..28201125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9577 | |EntrezGene=9577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1106 | |HGNC=1106 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZWH1 | |UniProt=Q6ZWH1 | ||
|association_with_transcript=0bp_to_AK123076_5end | |association_with_transcript=0bp_to_AK123076_5end | ||
|cluster_id=chr2:28201109..28201125,+ | |||
|coexpression_cluster_id=C684 | |||
|description=CAGE_peak_2_at_BRE_5end | |description=CAGE_peak_2_at_BRE_5end | ||
|id=chr2:28201109..28201125,+ | |id=chr2:28201109..28201125,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.24e-22!679;CL:0000004!1.24e-22!679;CL:0000255!1.24e-22!679;CL:0000012!1.99e-22!682;CL:0000222!5.42e-21!119;CL:0000055!3.78e-18!180;CL:0000144!9.70e-18!625;CL:0000003!1.35e-15!722;CL:0002371!2.76e-15!591;CL:0000680!4.71e-14!57;CL:0000056!4.71e-14!57;CL:0000355!4.71e-14!57;CL:0000183!5.94e-14!59;CL:0000187!8.88e-13!54;CL:0000220!9.84e-13!246;CL:0002321!2.86e-12!248;CL:0000057!1.18e-10!75;CL:0000048!2.15e-10!430;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000063!1.04e-09!578;CL:0000723!1.18e-09!436;CL:0000192!2.21e-09!42;CL:0000514!2.21e-09!42;CL:0000034!1.14e-08!444;CL:0000213!4.10e-07!57;CL:0000215!4.10e-07!57 | |ontology_enrichment_celltype=CL:0000548!1.24e-22!679;CL:0000004!1.24e-22!679;CL:0000255!1.24e-22!679;CL:0000012!1.99e-22!682;CL:0000222!5.42e-21!119;CL:0000055!3.78e-18!180;CL:0000144!9.70e-18!625;CL:0000003!1.35e-15!722;CL:0002371!2.76e-15!591;CL:0000680!4.71e-14!57;CL:0000056!4.71e-14!57;CL:0000355!4.71e-14!57;CL:0000183!5.94e-14!59;CL:0000187!8.88e-13!54;CL:0000220!9.84e-13!246;CL:0002321!2.86e-12!248;CL:0000057!1.18e-10!75;CL:0000048!2.15e-10!430;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000063!1.04e-09!578;CL:0000723!1.18e-09!436;CL:0000192!2.21e-09!42;CL:0000514!2.21e-09!42;CL:0000034!1.14e-08!444;CL:0000213!4.10e-07!57;CL:0000215!4.10e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000723;6.47e-10;61!CL:0000134;8.14e-10;55!CL:0000048;1.80e-08;58!CL:0000034;2.52e-07;69!CL:0000187;7.72e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.28e-18,121;CL:0000680,1.18e-11,58;CL:0000056,1.18e-11,58;CL:0000355,1.18e-11,58;CL:0000187,3.37e-10,55;CL:0002321,9.25e-10,250;CL:0000048,3.14e-08,427;CL:0000393,3.56e-08,61;CL:0000211,3.56e-08,61;CL:0000723,1.24e-07,433;CL:0000192,2.36e-07,43;CL:0000514,2.36e-07,43;CL:0000034,7.01e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.33e-09;14!DOID:120;3.50e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.88e-09,14;DOID:120,4.43e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0005256!6.83e-16!143;UBERON:0004290!1.97e-15!70;UBERON:0000914!6.36e-15!83;UBERON:0002329!6.36e-15!83;UBERON:0003077!6.36e-15!83;UBERON:0003059!6.36e-15!83;UBERON:0007282!6.36e-15!83;UBERON:0009618!6.36e-15!83;UBERON:0007285!6.36e-15!83;UBERON:0000926!7.61e-15!448;UBERON:0004120!7.61e-15!448;UBERON:0006603!7.61e-15!448;UBERON:0000486!7.55e-14!82;UBERON:0001134!5.39e-13!61;UBERON:0002036!5.39e-13!61;UBERON:0003082!5.39e-13!61;UBERON:0002100!7.90e-13!216;UBERON:0000490!1.10e-12!138;UBERON:0002385!5.96e-12!63;UBERON:0001015!5.96e-12!63;UBERON:0000383!5.96e-12!63;UBERON:0003104!3.81e-11!238;UBERON:0009142!3.81e-11!238;UBERON:0003914!2.14e-10!118;UBERON:0002049!5.43e-09!79;UBERON:0007798!5.43e-09!79;UBERON:0002204!1.77e-07!167;UBERON:0004872!2.30e-07!84;UBERON:0000467!9.70e-07!625;UBERON:0000055!9.86e-07!69 | |ontology_enrichment_uberon=UBERON:0005256!6.83e-16!143;UBERON:0004290!1.97e-15!70;UBERON:0000914!6.36e-15!83;UBERON:0002329!6.36e-15!83;UBERON:0003077!6.36e-15!83;UBERON:0003059!6.36e-15!83;UBERON:0007282!6.36e-15!83;UBERON:0009618!6.36e-15!83;UBERON:0007285!6.36e-15!83;UBERON:0000926!7.61e-15!448;UBERON:0004120!7.61e-15!448;UBERON:0006603!7.61e-15!448;UBERON:0000486!7.55e-14!82;UBERON:0001134!5.39e-13!61;UBERON:0002036!5.39e-13!61;UBERON:0003082!5.39e-13!61;UBERON:0002100!7.90e-13!216;UBERON:0000490!1.10e-12!138;UBERON:0002385!5.96e-12!63;UBERON:0001015!5.96e-12!63;UBERON:0000383!5.96e-12!63;UBERON:0003104!3.81e-11!238;UBERON:0009142!3.81e-11!238;UBERON:0003914!2.14e-10!118;UBERON:0002049!5.43e-09!79;UBERON:0007798!5.43e-09!79;UBERON:0002204!1.77e-07!167;UBERON:0004872!2.30e-07!84;UBERON:0000467!9.70e-07!625;UBERON:0000055!9.86e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.05e-07;31!UBERON:0001015;5.05e-07;31!UBERON:0000383;5.05e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.13e-13,78;UBERON:0002329,3.73e-11,71;UBERON:0003059,3.73e-11,71;UBERON:0007282,3.73e-11,71;UBERON:0004290,3.73e-11,71;UBERON:0009618,3.73e-11,71;UBERON:0003077,8.10e-11,72;UBERON:0007285,8.10e-11,72;UBERON:0007524,1.72e-10,73;UBERON:0000486,2.94e-10,83;UBERON:0001134,3.84e-10,62;UBERON:0002036,3.84e-10,62;UBERON:0003082,3.84e-10,62;UBERON:0002385,1.81e-09,64;UBERON:0001015,1.81e-09,64;UBERON:0000383,1.81e-09,64;UBERON:0005256,7.34e-09,122;UBERON:0002100,2.11e-08,199;UBERON:0000490,4.29e-08,148;UBERON:0003104,1.05e-07,160;UBERON:0009142,1.05e-07,160;UBERON:0002049,1.12e-07,78;UBERON:0007798,1.12e-07,78;UBERON:0003914,1.27e-07,117;UBERON:0000926,1.97e-07,315;UBERON:0004120,1.97e-07,315;UBERON:0006603,1.97e-07,315 | |||
|phase1_expression=0.54503513781167,4.28201047781966,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,4.91467873003018,11.8626198555313,2.40285509343189,8.96807725976742,0,0,3.36162573225888,3.01347264011988,11.684961446198,3.90346239032406,0.861847406537515,1.02000345622126,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.726991193897824,0.377875943688809,0,0.464858073811369,0,0.929119112685311,0,0,0,2.75796544589295,2.5819387343353,1.35426486594342,1.88242339542605,0.545812300115692,0.674170453335254,1.22433556948361,0.641858054152187,0.639337125799041,0,0,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0.502497330513487,1.5644487552606,0.217188844705117,0,0.736555271975129,0.316462387440884,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.501559486172034,0,0,0,1.00269411196656,0,0,0,0.128091319725675,1.04047478047903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.383587685530591,5.42158728576849,1.50401373190767,3.0417768981773,0,0.486634870302636,3.11964896641424,3.1042115644759,1.58102614247627,0,0,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,0.347140501607594,0,2.09749718104953,0.550236083880135,1.46296476575767,1.55050055501597,0,0.33472061276467,5.23678112241891,9.12326526862215,0.732186172644509,2.20597848207521,0,2.85759130509055,0.673588117878509,1.68917220724983,0,2.84779697870439,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,4.63432132846266,0,1.06400514659507,1.68203280042692,1.06748995729705,0,1.55605517699883,0.404132016209064,0.326923806226917,1.21085942115945,1.15235184896,1.17160715916898,1.5608003841516,1.1409436430889,0.747243402759005,0.822041490506354,0.161872944368132,0.561803226808994,2.85815839756851,0.122834317311768,0.929932030581889,0,0.247266929278557,1.82032272387605,4.31170885089743,0,0.125118519871964,1.10825646193673,5.26773145057006,4.90380473278431,1.20190447125277,0.567160915800105,0.538168907066586,0.640672166455702,2.96704661623387,0.300091096084402,0.721367704669072,1.03056216018252,2.04728541964749,0.506328996723799,0.68205903612839,0.757301322732344,0.736399189138395,0.969876340912871,0,1.0075209822764,0.67824236924195,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,100.127700691082,8.36213219650751,8.28809528114883,1.85747171212792,6.49691533502627,2.01121560067735,2.02301628093722,3.85617647813571,2.42646740011267,1.96091499683166,2.37270619111097,2.02246962240247,1.76599318612811,3.46272441251751,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0,4.72631925345123,0,0.614942192715568,2.40194934417936,0.439001141634502,0,0,0,0,1.03993478527958,1.44331342025273,0.115930404975077,0,3.3204282985047,4.62985512576611,0.380508304469197,0,0,0,3.04205544681009,2.0808362720422,7.49870671894216,1.17587489739202,0.567100388969546,0.53735113621709,0,3.4504441124869,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,2.69114602428866,2.61576041299968,1.6134422880609,1.42198887333556,7.15312891703765,0,0.26593811658487,0,3.60090323966999,5.67396528093113,1.5985330740966,0.714889968290738,2.17048642156577,4.93944202068461,1.95441710576241,0.355391948742546,0.791951872933429,22.9093926565285,42.7051394714144,10.3971910829339,3.64871341923571,0,0,0,0,5.70547620162874,2.31650090668127,2.4657158706046,6.26713371339634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,1.08506009479894,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,1.80567659836631,0,0,1.32845119707087,1.29058417979192,0.434418072340414,0.195801157462741,0.686286847621712,0.206768026122887,0,0,1.5156378572313,13.3148351608398,1.5119514666484,1.48864684691266,0.306923946576125,1.40330047216537,3.84417447767103,1.02341449813341,1.44768529029247,1.48418066444991,1.69630663182921,2.30830242907065,2.13530605635904,6.23105315020345,1.74315567689939,0.120859449591622,0.200506470303285,0,0.68888668898764,0.910455840033585,0.393373244878272,0.451199612907412,0.462092022626489,3.92174884588428,1.46139224653261,0.316654886678627,2.27466768141793,3.06168669497728,1.0795795805107,0,2.43851793789468,2.50844886927427,3.05851527654046,3.3243040357149,6.49236788694317,0,0,0.256450125116389,0,0,1.54561517471583,1.64825036673018,0.660075999364704,1.72279661398852,0.650060246036521,6.42735719376638,0.773365746336976,10.0131601124519,7.52168006158035,1.7918754422989,10.4197637522225,5.80066775656914,5.88063729171096,0.267096106940212,0.330569830721956,0.384380134730212,1.78657797492418,0,4.18360994367557,0.94443704049192,0,1.84820148105653,1.06461206063404,0,4.07713282028624,0.286249773483982,3.34942532423701,2.84741482246853,10.4846606658104,3.58256907835867,0,7.31867470229655,0,4.49681143958287,8.5106479218177,5.65499531259295,0.808729926293264,0,1.26377536871694,0.975267478179181,5.60541026151954,1.05650146756755,0.409499734223957,0.424216295861138,1.13008116620243,0,1.32687795048244,3.5076070820301,5.78775534266688,1.9676842561399,0.81164150785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| ||
|short_description=p2@BRE | |short_description=p2@BRE | ||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p2@BRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BRE_5end |
Coexpression cluster: | C684_pagetoid_mesothelioma_placenta_bone_papillotubular_Hair_Fibroblast |
Association with transcript: | 0bp_to_AK123076_5end |
EntrezGene: | BRE |
HGNC: | 1106 |
UniProt: | Q6ZWH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.28e-18 | 121 |
muscle precursor cell | 1.18e-11 | 58 |
myoblast | 1.18e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-11 | 58 |
muscle cell | 3.37e-10 | 55 |
embryonic cell | 9.25e-10 | 250 |
multi fate stem cell | 3.14e-08 | 427 |
electrically responsive cell | 3.56e-08 | 61 |
electrically active cell | 3.56e-08 | 61 |
somatic stem cell | 1.24e-07 | 433 |
smooth muscle cell | 2.36e-07 | 43 |
smooth muscle myoblast | 2.36e-07 | 43 |
stem cell | 7.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.13e-13 | 78 |
somite | 3.73e-11 | 71 |
presomitic mesoderm | 3.73e-11 | 71 |
presumptive segmental plate | 3.73e-11 | 71 |
dermomyotome | 3.73e-11 | 71 |
trunk paraxial mesoderm | 3.73e-11 | 71 |
paraxial mesoderm | 8.10e-11 | 72 |
presumptive paraxial mesoderm | 8.10e-11 | 72 |
dense mesenchyme tissue | 1.72e-10 | 73 |
multilaminar epithelium | 2.94e-10 | 83 |
skeletal muscle tissue | 3.84e-10 | 62 |
striated muscle tissue | 3.84e-10 | 62 |
myotome | 3.84e-10 | 62 |
muscle tissue | 1.81e-09 | 64 |
musculature | 1.81e-09 | 64 |
musculature of body | 1.81e-09 | 64 |
trunk mesenchyme | 7.34e-09 | 122 |
trunk | 2.11e-08 | 199 |
unilaminar epithelium | 4.29e-08 | 148 |
mesenchyme | 1.05e-07 | 160 |
entire embryonic mesenchyme | 1.05e-07 | 160 |
vasculature | 1.12e-07 | 78 |
vascular system | 1.12e-07 | 78 |
epithelial tube | 1.27e-07 | 117 |
mesoderm | 1.97e-07 | 315 |
mesoderm-derived structure | 1.97e-07 | 315 |
presumptive mesoderm | 1.97e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.88e-09 | 14 |
female reproductive organ cancer | 4.43e-07 | 27 |