FFCP PHASE1:Hg19::chr20:47897225..47897227,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:47897225..47897227,+ to FFCP PHASE1:Hg19::chr20:47897225..47897227,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=692057 | |EntrezGene=692057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=32708 | |HGNC=32708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000391002,NR_003030,uc002xup.1_5end | |||
|cluster_id=chr20:47897225..47897227,+ | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_2_at_SNORD12_5end | |||
|id=chr20:47897225..47897227,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000081;2.82e-08;11!CL:0000775;5.01e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,2.82e-08,11;CL:0000775,4.84e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.58e-08!235;DOID:0050687!3.58e-08!143;DOID:305!3.93e-08!106;DOID:14566!1.00e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:154;3.34e-11;2!DOID:4236;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.70e-11,2;DOID:4236,3.70e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.16e-21;1!UBERON:0005208;5.16e-21;1!UBERON:0004145;5.16e-21;1!UBERON:0005946;5.16e-21;1!UBERON:0005965;5.16e-21;1!UBERON:0002078;5.16e-21;1!UBERON:0002081;3.34e-11;2!UBERON:0002133;3.34e-11;2!UBERON:0003978;6.78e-08;3!UBERON:0004151;6.78e-08;3!UBERON:0000946;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.22e-21,1;UBERON:0005208,4.22e-21,1;UBERON:0005946,4.22e-21,1;UBERON:0005965,4.22e-21,1;UBERON:0002078,4.22e-21,1;UBERON:0002081,3.02e-11,2;UBERON:0002133,3.02e-11,2;UBERON:0010227,3.02e-11,2;UBERON:0003978,6.34e-08,3;UBERON:0009751,6.34e-08,3;UBERON:0004151,6.34e-08,3;UBERON:0000946,6.34e-08,3;UBERON:0002523,6.34e-08,3;UBERON:0005983,6.34e-08,3;UBERON:0004145,6.34e-08,3;UBERON:0002165,6.34e-08,3;UBERON:0002062,6.34e-08,3;UBERON:0007280,6.34e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0,0.410623275218653,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,1.5905718941022,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,1.03056216018252,0,0,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,63.3977064417,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.987884678879706,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0.254253650292766,0.236387681767936,0,0,1.04174996959975,0,0,0,0.331737779793674,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.269272933229316,0.325942115766024,0,0,0,0,0.31396051279005,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,2.6686901581256,0.370691816839509,0,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.343189995723929,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,1.43574604915363,0.199679000498991,0,0,0,0,1.16495949527454,0.315132729228895,0.0824158583811665,0.202210631562555,0.0984274815147488,0.169346664131569,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0,0,0,0.335434687599266,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0.276697269872462,0.124980407962107,0,0,0.705797459094515,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.706756583783524,0,0,0,0,0,0.276516872303462,0.584580926518165,0,0,0,0.245772908753719,0.211312123358627,0.59996218756479,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0.495743057036009,0,0,0.157723490002507,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0.527613733078862,0,0,0.336283722218824,0.606965604236632,0,0,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0.917458566809082,0.430018749454354,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.504665699340316,0.65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| |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0,0.410623275218653,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,1.5905718941022,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,1.03056216018252,0,0,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,63.3977064417,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.987884678879706,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0.254253650292766,0.236387681767936,0,0,1.04174996959975,0,0,0,0.331737779793674,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.269272933229316,0.325942115766024,0,0,0,0,0.31396051279005,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,2.6686901581256,0.370691816839509,0,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.343189995723929,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,1.43574604915363,0.199679000498991,0,0,0,0,1.16495949527454,0.315132729228895,0.0824158583811665,0.202210631562555,0.0984274815147488,0.169346664131569,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0,0,0,0.335434687599266,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0,0.276697269872462,0.124980407962107,0,0,0.705797459094515,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.706756583783524,0,0,0,0,0,0.276516872303462,0.584580926518165,0,0,0,0.245772908753719,0.211312123358627,0.59996218756479,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0.495743057036009,0,0,0.157723490002507,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0.527613733078862,0,0,0.336283722218824,0.606965604236632,0,0,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0.917458566809082,0.430018749454354,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.504665699340316,0.65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| ||
|short_description=p2@SNORD12 | |||
}} | }} |
Latest revision as of 18:42, 16 September 2015
Short description: | p2@SNORD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNORD12_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 5bp_to_ENST00000391002, NR_003030, uc002xup.1_5end |
EntrezGene: | SNORD12 |
HGNC: | 32708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 2.82e-08 | 11 |
neutrophil | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.22e-21 | 1 |
right atrium valve | 4.22e-21 | 1 |
outflow tract of atrium | 4.22e-21 | 1 |
outflow part of right atrium | 4.22e-21 | 1 |
right cardiac atrium | 4.22e-21 | 1 |
cardiac atrium | 3.02e-11 | 2 |
atrioventricular valve | 3.02e-11 | 2 |
future cardiac atrium | 3.02e-11 | 2 |
valve | 6.34e-08 | 3 |
cardiac mesenchyme | 6.34e-08 | 3 |
cardiac chamber | 6.34e-08 | 3 |
cardial valve | 6.34e-08 | 3 |
tunica intima | 6.34e-08 | 3 |
heart layer | 6.34e-08 | 3 |
outflow tract | 6.34e-08 | 3 |
endocardium | 6.34e-08 | 3 |
endocardial cushion | 6.34e-08 | 3 |
presumptive endocardium | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.70e-11 | 2 |
carcinosarcoma | 3.70e-11 | 2 |