FFCP PHASE1:Hg19::chr2:28114023..28114032,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100302650 | |EntrezGene=100302650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_NR_028308,uc010ymh.1_5end | |association_with_transcript=-42bp_to_NR_028308,uc010ymh.1_5end | ||
|cluster_id=chr2:28114023..28114032,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_LOC100302650_5end | |description=CAGE_peak_4_at_LOC100302650_5end | ||
|id=chr2:28114023..28114032,- | |id=chr2:28114023..28114032,- | ||
|ontology_enrichment_celltype=CL:0002057!2.04e-68!42;CL:0000766!2.97e-66!76;CL:0000738!4.25e-64!140;CL:0000860!5.92e-63!45;CL:0000557!7.60e-52!71;CL:0002031!7.96e-51!124;CL:0000839!1.68e-50!70;CL:0000037!9.56e-50!172;CL:0000566!9.56e-50!172;CL:0002087!5.12e-48!119;CL:0002032!3.58e-46!165;CL:0000837!3.58e-46!165;CL:0000988!7.91e-46!182;CL:0002009!3.32e-45!65;CL:0002194!8.56e-45!63;CL:0000576!8.56e-45!63;CL:0000040!8.56e-45!63;CL:0000559!8.56e-45!63;CL:0000763!2.87e-41!112;CL:0000049!2.87e-41!112;CL:0000134!4.89e-17!358;CL:0002393!8.95e-17!9;CL:0002397!8.95e-17!9;CL:0002320!2.68e-16!365;CL:0000094!4.03e-16!8;CL:0000219!1.04e-13!390;CL:0000081!3.14e-11!11;CL:0000048!1.17e-10!430;CL:0000034!2.81e-10!444;CL:0000723!3.13e-10!436;CL:0002274!1.13e-09!5;CL:0000457!1.13e-09!5;CL:0002191!1.13e-09!5;CL:0000097!1.13e-09!5;CL:0000831!1.13e-09!5;CL:0002028!1.13e-09!5;CL:0000775!3.33e-07!3;CL:0000791!5.21e-07!18;CL:0000789!5.21e-07!18;CL:0002420!5.21e-07!18;CL:0002419!5.21e-07!18;CL:0000790!5.21e-07!18;CL:0000623!9.70e-07!3;CL:0000825!9.70e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.04e-68!42;CL:0000766!2.97e-66!76;CL:0000738!4.25e-64!140;CL:0000860!5.92e-63!45;CL:0000557!7.60e-52!71;CL:0002031!7.96e-51!124;CL:0000839!1.68e-50!70;CL:0000037!9.56e-50!172;CL:0000566!9.56e-50!172;CL:0002087!5.12e-48!119;CL:0002032!3.58e-46!165;CL:0000837!3.58e-46!165;CL:0000988!7.91e-46!182;CL:0002009!3.32e-45!65;CL:0002194!8.56e-45!63;CL:0000576!8.56e-45!63;CL:0000040!8.56e-45!63;CL:0000559!8.56e-45!63;CL:0000763!2.87e-41!112;CL:0000049!2.87e-41!112;CL:0000134!4.89e-17!358;CL:0002393!8.95e-17!9;CL:0002397!8.95e-17!9;CL:0002320!2.68e-16!365;CL:0000094!4.03e-16!8;CL:0000219!1.04e-13!390;CL:0000081!3.14e-11!11;CL:0000048!1.17e-10!430;CL:0000034!2.81e-10!444;CL:0000723!3.13e-10!436;CL:0002274!1.13e-09!5;CL:0000457!1.13e-09!5;CL:0002191!1.13e-09!5;CL:0000097!1.13e-09!5;CL:0000831!1.13e-09!5;CL:0002028!1.13e-09!5;CL:0000775!3.33e-07!3;CL:0000791!5.21e-07!18;CL:0000789!5.21e-07!18;CL:0002420!5.21e-07!18;CL:0002419!5.21e-07!18;CL:0000790!5.21e-07!18;CL:0000623!9.70e-07!3;CL:0000825!9.70e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-67;33!CL:0002057;1.33e-67;33!CL:0000473;1.29e-47;39!CL:0000234;1.29e-47;39!CL:0000576;1.52e-41;48!CL:0000766;4.65e-37;69!CL:0000094;1.67e-17;8!CL:0000763;1.08e-16;100!CL:0002087;4.01e-14;104!CL:0000081;1.17e-12;11!CL:0000771;1.54e-12;2!CL:0000738;2.05e-12;136!CL:0000775;2.30e-08;3!CL:0002393;2.47e-08;6!CL:0002397;2.47e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.89e-79,42;CL:0002057,2.89e-79,42;CL:0000766,2.67e-73,72;CL:0000473,1.14e-68,48;CL:0000234,1.14e-68,48;CL:0000839,5.94e-56,66;CL:0000557,4.81e-55,67;CL:0002194,7.81e-54,59;CL:0000576,7.81e-54,59;CL:0000040,7.81e-54,59;CL:0000559,7.81e-54,59;CL:0002009,6.43e-52,61;CL:0000763,5.37e-47,108;CL:0000049,5.37e-47,108;CL:0000738,1.33e-46,136;CL:0000037,1.58e-36,168;CL:0002032,4.17e-36,161;CL:0000837,4.17e-36,161;CL:0002031,1.09e-35,120;CL:0002087,1.15e-34,115;CL:0000988,2.41e-34,177;CL:0000094,1.39e-17,8;CL:0000134,7.91e-14,354;CL:0002320,2.00e-13,361;CL:0000081,1.03e-12,11;CL:0000771,1.55e-12,2;CL:0000219,5.21e-12,386;CL:0000034,1.22e-10,441;CL:0000048,2.83e-10,427;CL:0000723,4.92e-10,433;CL:0002393,2.19e-09,9;CL:0002397,2.19e-09,9;CL:0000775,1.99e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-61;42!CL:0000049;7.25e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.98e-46!80;UBERON:0001474!3.95e-44!86;UBERON:0002390!1.11e-43!102;UBERON:0003061!1.11e-43!102;UBERON:0002193!7.66e-40!112;UBERON:0004765!6.16e-37!101;UBERON:0001434!6.16e-37!101;UBERON:0002405!6.51e-32!115;UBERON:0002204!1.63e-16!167;UBERON:0002384!6.04e-16!375;UBERON:0003081!8.55e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.28e-48,76;UBERON:0001474,4.84e-44,82;UBERON:0004765,1.18e-39,90;UBERON:0002390,8.69e-39,98;UBERON:0003061,8.69e-39,98;UBERON:0002405,3.35e-38,93;UBERON:0001434,3.80e-35,100;UBERON:0002193,1.12e-34,108;UBERON:0002204,8.94e-19,167;UBERON:0003081,1.03e-15,203;UBERON:0002384,7.05e-13,371;UBERON:0000926,5.30e-08,315;UBERON:0004120,5.30e-08,315;UBERON:0006603,5.30e-08,315 | |||
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|short_description=p4@LOC100302650 | |short_description=p4@LOC100302650 | ||
}} | }} |
Latest revision as of 18:35, 16 September 2015
Short description: | p4@LOC100302650 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100302650_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -42bp_to_NR_028308, uc010ymh.1_5end |
EntrezGene: | LOC100302650 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.28e-48 | 76 |
bone element | 4.84e-44 | 82 |
skeletal element | 1.18e-39 | 90 |
hematopoietic system | 8.69e-39 | 98 |
blood island | 8.69e-39 | 98 |
immune system | 3.35e-38 | 93 |
skeletal system | 3.80e-35 | 100 |
hemolymphoid system | 1.12e-34 | 108 |
musculoskeletal system | 8.94e-19 | 167 |
lateral plate mesoderm | 1.03e-15 | 203 |
connective tissue | 7.05e-13 | 371 |
mesoderm | 5.30e-08 | 315 |
mesoderm-derived structure | 5.30e-08 | 315 |
presumptive mesoderm | 5.30e-08 | 315 |