FFCP PHASE1:Hg19::chr4:171012844..171012850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51166 | |EntrezGene=51166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17929 | |HGNC=17929 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC56 | |UniProt=D6RC56 | ||
|association_with_transcript=0bp_to_ENST00000502392_5end | |association_with_transcript=0bp_to_ENST00000502392_5end | ||
|cluster_id=chr4:171012844..171012850,- | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_12_at_AADAT_5end | |description=CAGE_peak_12_at_AADAT_5end | ||
|id=chr4:171012844..171012850,- | |id=chr4:171012844..171012850,- | ||
|ontology_enrichment_celltype=CL:0000322!1.29e-21!3;CL:1001319!1.65e-16!1;CL:1000600!1.65e-16!1;CL:0000082!6.94e-08!19;CL:0002202!7.77e-08!9;CL:0002632!7.77e-08!9 | |ontology_enrichment_celltype=CL:0000322!1.29e-21!3;CL:1001319!1.65e-16!1;CL:1000600!1.65e-16!1;CL:0000082!6.94e-08!19;CL:0002202!7.77e-08!9;CL:0002632!7.77e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000322;5.04e-34;3!CL:0002202;2.31e-12;9!CL:0002632;2.31e-12;9!CL:0002368;5.49e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,5.96e-34,3;CL:0002202,2.45e-12,9;CL:0002632,2.45e-12,9;CL:0002368,5.70e-09,13 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | |||
|ontology_enrichment_disease=DOID:1325!9.52e-10!7;DOID:3904!9.52e-10!7;DOID:3910!3.71e-09!2;DOID:4468!5.94e-09!2;DOID:3905!8.90e-08!9 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.52e-50;2!DOID:3908;4.66e-21;5!DOID:1325;1.78e-15;7!DOID:3904;1.78e-15;7!DOID:3905;2.31e-12;9!DOID:1324;5.74e-08;15!DOID:0050615;1.49e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.52e-50,2;DOID:3908,5.15e-21,5;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004821!1.29e-21!3;UBERON:0003215!1.29e-21!3;UBERON:0002299!1.29e-21!3;UBERON:0006524!1.29e-21!3;UBERON:0008874!1.29e-21!3;UBERON:0002169!1.29e-21!3;UBERON:0004894!1.29e-21!3;UBERON:0000473!4.18e-18!8;UBERON:0004645!1.65e-16!1;UBERON:0001256!1.65e-16!1;UBERON:0001259!1.65e-16!1;UBERON:0003135!2.39e-13!11;UBERON:0000060!3.60e-12!12;UBERON:0004903!3.71e-09!2;UBERON:0002173!3.71e-09!2;UBERON:0002186!3.71e-09!2;UBERON:0001255!6.42e-09!2;UBERON:0001556!6.42e-09!2;UBERON:0004802!6.94e-08!19;UBERON:0000115!6.94e-08!19;UBERON:0000991!2.95e-07!21;UBERON:0009196!2.95e-07!21;UBERON:0009117!2.95e-07!21;UBERON:0005564!2.95e-07!21;UBERON:0004176!5.98e-07!22;UBERON:0003101!5.98e-07!22;UBERON:0000079!5.98e-07!22;UBERON:0002048!7.03e-07!22;UBERON:0000117!7.03e-07!22;UBERON:0000171!7.03e-07!22;UBERON:0000170!7.03e-07!22;UBERON:0005597!7.03e-07!22;UBERON:0000118!7.03e-07!22;UBERON:0000464!8.64e-07!104 | |ontology_enrichment_uberon=UBERON:0004821!1.29e-21!3;UBERON:0003215!1.29e-21!3;UBERON:0002299!1.29e-21!3;UBERON:0006524!1.29e-21!3;UBERON:0008874!1.29e-21!3;UBERON:0002169!1.29e-21!3;UBERON:0004894!1.29e-21!3;UBERON:0000473!4.18e-18!8;UBERON:0004645!1.65e-16!1;UBERON:0001256!1.65e-16!1;UBERON:0001259!1.65e-16!1;UBERON:0003135!2.39e-13!11;UBERON:0000060!3.60e-12!12;UBERON:0004903!3.71e-09!2;UBERON:0002173!3.71e-09!2;UBERON:0002186!3.71e-09!2;UBERON:0001255!6.42e-09!2;UBERON:0001556!6.42e-09!2;UBERON:0004802!6.94e-08!19;UBERON:0000115!6.94e-08!19;UBERON:0000991!2.95e-07!21;UBERON:0009196!2.95e-07!21;UBERON:0009117!2.95e-07!21;UBERON:0005564!2.95e-07!21;UBERON:0004176!5.98e-07!22;UBERON:0003101!5.98e-07!22;UBERON:0000079!5.98e-07!22;UBERON:0002048!7.03e-07!22;UBERON:0000117!7.03e-07!22;UBERON:0000171!7.03e-07!22;UBERON:0000170!7.03e-07!22;UBERON:0005597!7.03e-07!22;UBERON:0000118!7.03e-07!22;UBERON:0000464!8.64e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.52e-50;2!UBERON:0002173;3.52e-50;2!UBERON:0002186;3.52e-50;2!UBERON:0004821;5.04e-34;3!UBERON:0007499;5.04e-34;3!UBERON:0003215;5.04e-34;3!UBERON:0010368;5.04e-34;3!UBERON:0009911;5.04e-34;3!UBERON:0002299;5.04e-34;3!UBERON:0006524;5.04e-34;3!UBERON:0008874;5.04e-34;3!UBERON:0002169;5.04e-34;3!UBERON:0004894;5.04e-34;3!UBERON:0009856;6.30e-26;4!UBERON:0000473;1.00e-13;8!UBERON:0000058;2.87e-11;10!UBERON:0003135;2.27e-10;11!UBERON:0007196;5.74e-08;15!UBERON:0001558;5.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.52e-50,2;UBERON:0002173,4.52e-50,2;UBERON:0002186,4.52e-50,2;UBERON:0004821,5.96e-34,3;UBERON:0003215,5.96e-34,3;UBERON:0010368,5.96e-34,3;UBERON:0009911,5.96e-34,3;UBERON:0002299,5.96e-34,3;UBERON:0006524,5.96e-34,3;UBERON:0008874,5.96e-34,3;UBERON:0002169,5.96e-34,3;UBERON:0004894,5.96e-34,3;UBERON:0000473,9.39e-14,8;UBERON:0003135,2.16e-10,11;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p12@AADAT | |short_description=p12@AADAT | ||
}} | }} |
Latest revision as of 18:15, 16 September 2015
Short description: | p12@AADAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AADAT_5end |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | 0bp_to_ENST00000502392_5end |
EntrezGene: | AADAT |
HGNC: | 17929 |
UniProt: | D6RC56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 5.96e-34 | 3 |
epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
respiratory epithelial cell | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.52e-50 | 2 |
alveolar duct | 4.52e-50 | 2 |
bronchiole | 4.52e-50 | 2 |
pulmonary alveolus epithelium | 5.96e-34 | 3 |
alveolus | 5.96e-34 | 3 |
pulmonary lobule | 5.96e-34 | 3 |
lobule | 5.96e-34 | 3 |
alveolus of lung | 5.96e-34 | 3 |
alveolar system | 5.96e-34 | 3 |
pulmonary acinus | 5.96e-34 | 3 |
alveolar sac | 5.96e-34 | 3 |
alveolar wall | 5.96e-34 | 3 |
testis | 9.39e-14 | 8 |
male reproductive organ | 2.16e-10 | 11 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.52e-50 | 2 |
non-small cell lung carcinoma | 5.15e-21 | 5 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |