FFCP PHASE1:Hg19::chr8:136469950..136469961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10656 | |EntrezGene=10656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18117 | |HGNC=18117 | ||
|TSSclassifier=strong | |||
|UniProt=O75525 | |UniProt=O75525 | ||
|association_with_transcript=234bp_to_NM_006558,uc003yuv.2,uc003yuw.2_5end | |association_with_transcript=234bp_to_NM_006558,uc003yuv.2,uc003yuw.2_5end | ||
|cluster_id=chr8:136469950..136469961,+ | |||
|description=CAGE_peak_6_at_KHDRBS3_5end | |description=CAGE_peak_6_at_KHDRBS3_5end | ||
|id=chr8:136469950..136469961,+ | |id=chr8:136469950..136469961,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.70e-36;2!CL:0002567;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0000047;1.70e-36;2!CL:0002567;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.63e-10,8;CL:0002567,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.77e-08;10!UBERON:0005564;2.77e-08;10!UBERON:0004161;1.64e-07;11 | |ontology_enrichment_development_v019=UBERON:0009117;2.77e-08;10!UBERON:0005564;2.77e-08;10!UBERON:0004161;1.64e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-20!115;UBERON:0001017!1.11e-12!82;UBERON:0005743!1.96e-12!86;UBERON:0001893!1.54e-11!34;UBERON:0002780!5.53e-11!41;UBERON:0001890!5.53e-11!41;UBERON:0006240!5.53e-11!41;UBERON:0001049!7.42e-11!57;UBERON:0005068!7.42e-11!57;UBERON:0006241!7.42e-11!57;UBERON:0007135!7.42e-11!57;UBERON:0002619!1.02e-10!22;UBERON:0003080!1.37e-10!42;UBERON:0002791!1.58e-10!33;UBERON:0000073!2.37e-10!94;UBERON:0001016!2.37e-10!94;UBERON:0000956!2.52e-10!25;UBERON:0000203!2.52e-10!25;UBERON:0001869!6.97e-10!32;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0002616!2.94e-09!59;UBERON:0002020!8.14e-09!34;UBERON:0003528!8.14e-09!34;UBERON:0001950!8.89e-09!20;UBERON:0002346!3.60e-08!90;UBERON:0000473!1.99e-07!8;UBERON:0003056!4.82e-07!61;UBERON:0003135!6.13e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!9.08e-20!115;UBERON:0001017!1.11e-12!82;UBERON:0005743!1.96e-12!86;UBERON:0001893!1.54e-11!34;UBERON:0002780!5.53e-11!41;UBERON:0001890!5.53e-11!41;UBERON:0006240!5.53e-11!41;UBERON:0001049!7.42e-11!57;UBERON:0005068!7.42e-11!57;UBERON:0006241!7.42e-11!57;UBERON:0007135!7.42e-11!57;UBERON:0002619!1.02e-10!22;UBERON:0003080!1.37e-10!42;UBERON:0002791!1.58e-10!33;UBERON:0000073!2.37e-10!94;UBERON:0001016!2.37e-10!94;UBERON:0000956!2.52e-10!25;UBERON:0000203!2.52e-10!25;UBERON:0001869!6.97e-10!32;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0002616!2.94e-09!59;UBERON:0002020!8.14e-09!34;UBERON:0003528!8.14e-09!34;UBERON:0001950!8.89e-09!20;UBERON:0002346!3.60e-08!90;UBERON:0000473!1.99e-07!8;UBERON:0003056!4.82e-07!61;UBERON:0003135!6.13e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.75e-15;5!UBERON:0000473;3.94e-10;8!UBERON:0003135;1.31e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0002021;1.75e-15;5!UBERON:0000473;3.94e-10;8!UBERON:0003135;1.31e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.17e-15,5;UBERON:0000473,4.03e-10,8;UBERON:0003135,1.33e-07,11 | |||
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| ||
|short_description=p6@KHDRBS3 | |short_description=p6@KHDRBS3 | ||
}} | }} |
Latest revision as of 18:12, 16 September 2015
Short description: | p6@KHDRBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KHDRBS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 234bp_to_NM_006558, uc003yuv.2, uc003yuw.2_5end |
EntrezGene: | KHDRBS3 |
HGNC: | 18117 |
UniProt: | O75525 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.63e-10 | 8 |
light melanocyte | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.17e-15 | 5 |
testis | 4.03e-10 | 8 |
male reproductive organ | 1.33e-07 | 11 |