FFCP PHASE1:Hg19::chr5:162930114..162930125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27430 | |EntrezGene=27430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6905 | |HGNC=6905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000280969_5end | |association_with_transcript=0bp_to_ENST00000280969_5end | ||
|cluster_id=chr5:162930114..162930125,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_9_at_MAT2B_5end | |description=CAGE_peak_9_at_MAT2B_5end | ||
|id=chr5:162930114..162930125,+ | |id=chr5:162930114..162930125,+ | ||
|ontology_enrichment_celltype=CL:0000838!8.23e-15!52;CL:0000542!2.39e-14!53;CL:0000051!2.39e-14!53;CL:0002087!3.88e-11!119;CL:0000084!1.34e-09!25;CL:0000827!1.34e-09!25;CL:0000791!1.55e-09!18;CL:0000789!1.55e-09!18;CL:0002420!1.55e-09!18;CL:0002419!1.55e-09!18;CL:0000790!1.55e-09!18;CL:0000738!9.65e-09!140;CL:0002031!2.95e-08!124;CL:0000625!5.84e-08!11 | |ontology_enrichment_celltype=CL:0000838!8.23e-15!52;CL:0000542!2.39e-14!53;CL:0000051!2.39e-14!53;CL:0002087!3.88e-11!119;CL:0000084!1.34e-09!25;CL:0000827!1.34e-09!25;CL:0000791!1.55e-09!18;CL:0000789!1.55e-09!18;CL:0002420!1.55e-09!18;CL:0002419!1.55e-09!18;CL:0000790!1.55e-09!18;CL:0000738!9.65e-09!140;CL:0002031!2.95e-08!124;CL:0000625!5.84e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.02e-21;18!CL:0000789;1.02e-21;18!CL:0002419;1.02e-21;18!CL:0000625;1.27e-18;11!CL:0000084;1.92e-15;25!CL:0000898;4.59e-12;3!CL:0000511;1.68e-09;1!CL:0002625;1.68e-09;1!CL:0000216;1.68e-09;1!CL:0000895;1.68e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.07e-22,18;CL:0000789,7.07e-22,18;CL:0002420,7.07e-22,18;CL:0002419,7.07e-22,18;CL:0000790,7.07e-22,18;CL:0000625,9.06e-19,11;CL:0000084,1.48e-15,25;CL:0000827,1.48e-15,25;CL:0000898,3.99e-12,3;CL:0000838,1.42e-11,52;CL:0000542,2.49e-11,53;CL:0000051,2.49e-11,53;CL:0000810,1.15e-09,1;CL:0000895,1.15e-09,1;CL:0002436,1.15e-09,1;CL:0002427,1.15e-09,1;CL:0002428,1.15e-09,1;CL:0002429,1.15e-09,1;CL:0002433,1.15e-09,1;CL:0002431,1.15e-09,1;CL:0002432,1.15e-09,1;CL:0000511,1.62e-09,1;CL:0002625,1.62e-09,1;CL:0000216,1.62e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.02e-21;18!CL:0002427;1.68e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.42e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.68e-09;1!UBERON:0001343;1.68e-09;1!UBERON:0004910;1.68e-09;1!UBERON:0004813;1.68e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.62e-09,1;UBERON:0001343,1.62e-09,1;UBERON:0004910,1.62e-09,1;UBERON:0005154,1.62e-09,1;UBERON:0005295,1.62e-09,1;UBERON:0004813,1.62e-09,1;UBERON:0005297,1.62e-09,1;UBERON:0005294,1.62e-09,1;UBERON:0010141,1.62e-09,1;UBERON:0005891,1.62e-09,1 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0,0,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.633765858935825,0.212604299965044,0,0.22465726229299,0,0,0,0.19891667719909,0,1.75996244461323,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.822405995998037,2.84217042164153,0,0.473447805734733,0,4.34500781852177,2.06224135232386,2.21533894583621,4.06205795647523,2.68991771423918,3.51160238411671,0.164437904603676,0.552700035571697,0.869409257205157,0.14828656316206,0,1.04535523804977,3.39928028092699,1.91610246800961,2.40539211837841,2.27717722817553,1.27426165729639,0.651083453856419,0.950452044448374,1.95747654801105,1.66382594500744,0,1.89421801635213,3.28451198768419,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,1.18218456121156,0.646882724578552,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,1.19115887728894,2.05681136543097,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.999936979274649,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0,0,0,0,0,0.476128862927481,0.322944549180031,0.682821857254437,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 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|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0,0,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0.633765858935825,0.212604299965044,0,0.22465726229299,0,0,0,0.19891667719909,0,1.75996244461323,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.822405995998037,2.84217042164153,0,0.473447805734733,0,4.34500781852177,2.06224135232386,2.21533894583621,4.06205795647523,2.68991771423918,3.51160238411671,0.164437904603676,0.552700035571697,0.869409257205157,0.14828656316206,0,1.04535523804977,3.39928028092699,1.91610246800961,2.40539211837841,2.27717722817553,1.27426165729639,0.651083453856419,0.950452044448374,1.95747654801105,1.66382594500744,0,1.89421801635213,3.28451198768419,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,1.18218456121156,0.646882724578552,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,1.19115887728894,2.05681136543097,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.999936979274649,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0,0,0,0,0,0.476128862927481,0.322944549180031,0.682821857254437,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | ||
|short_description=p9@MAT2B | |short_description=p9@MAT2B | ||
}} | }} |
Latest revision as of 18:05, 16 September 2015
Short description: | p9@MAT2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MAT2B_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000280969_5end |
EntrezGene: | MAT2B |
HGNC: | 6905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.07e-22 | 18 |
alpha-beta T cell | 7.07e-22 | 18 |
immature T cell | 7.07e-22 | 18 |
mature T cell | 7.07e-22 | 18 |
immature alpha-beta T cell | 7.07e-22 | 18 |
CD8-positive, alpha-beta T cell | 9.06e-19 | 11 |
T cell | 1.48e-15 | 25 |
pro-T cell | 1.48e-15 | 25 |
naive T cell | 3.99e-12 | 3 |
lymphoid lineage restricted progenitor cell | 1.42e-11 | 52 |
lymphocyte | 2.49e-11 | 53 |
common lymphoid progenitor | 2.49e-11 | 53 |
CD4-positive, alpha-beta thymocyte | 1.15e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.15e-09 | 1 |
mature CD4 single-positive thymocyte | 1.15e-09 | 1 |
resting double-positive thymocyte | 1.15e-09 | 1 |
double-positive blast | 1.15e-09 | 1 |
CD69-positive double-positive thymocyte | 1.15e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.15e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.15e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.15e-09 | 1 |
androgen binding protein secreting cell | 1.62e-09 | 1 |
seminiferous tubule epithelial cell | 1.62e-09 | 1 |
Sertoli cell | 1.62e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.62e-09 | 1 |
seminiferous tubule of testis | 1.62e-09 | 1 |
epithelium of male gonad | 1.62e-09 | 1 |
epithelial cord | 1.62e-09 | 1 |
sex cord | 1.62e-09 | 1 |
seminiferous tubule epithelium | 1.62e-09 | 1 |
testis sex cord | 1.62e-09 | 1 |
genital ridge | 1.62e-09 | 1 |
primitive sex cord of indifferent gonad | 1.62e-09 | 1 |
coelomic epithelium | 1.62e-09 | 1 |