FFCP PHASE1:Hg19::chr17:61776662..61776738,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:61776662..61776738,-
|short_description=p2@LIMD2
|description=CAGE_peak_2_at_LIMD2_5end
|association_with_transcript=0bp_to_AK307353,AK310718_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80774 | |EntrezGene=80774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28142 | |HGNC=28142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK307353,AK310718_5end | |||
|cluster_id=chr17:61776662..61776738,- | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_2_at_LIMD2_5end | |||
|id=chr17:61776662..61776738,- | |||
|ontology_enrichment_celltype=CL:0000988!3.23e-58!182;CL:0000037!4.24e-57!172;CL:0000566!4.24e-57!172;CL:0002032!1.40e-53!165;CL:0000837!1.40e-53!165;CL:0000738!1.56e-50!140;CL:0002087!3.06e-46!119;CL:0002031!2.01e-43!124;CL:0000763!1.54e-27!112;CL:0000049!1.54e-27!112;CL:0000766!1.03e-24!76;CL:0000542!3.38e-24!53;CL:0000051!3.38e-24!53;CL:0000838!7.54e-24!52;CL:0002057!7.41e-21!42;CL:0000839!9.60e-21!70;CL:0002194!1.16e-19!63;CL:0000576!1.16e-19!63;CL:0000040!1.16e-19!63;CL:0000559!1.16e-19!63;CL:0000557!3.16e-19!71;CL:0002009!4.32e-18!65;CL:0000860!2.80e-17!45;CL:0000084!2.56e-12!25;CL:0000827!2.56e-12!25;CL:0000945!2.80e-11!24;CL:0000826!2.80e-11!24;CL:0000791!4.94e-11!18;CL:0000789!4.94e-11!18;CL:0002420!4.94e-11!18;CL:0002419!4.94e-11!18;CL:0000790!4.94e-11!18;CL:0002320!4.58e-09!365;CL:0000134!8.54e-09!358;CL:0000236!8.56e-09!14;CL:0000219!5.57e-08!390;CL:0000625!2.60e-07!11;CL:0002393!6.35e-07!9;CL:0002397!6.35e-07!9;CL:0000034!7.44e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.85e-16;53!CL:0000860;2.24e-15;33!CL:0002057;2.24e-15;33!CL:0002087;2.55e-15;104!CL:0000576;2.57e-15;48!CL:0000473;1.33e-14;39!CL:0000234;1.33e-14;39!CL:0000766;1.03e-13;69!CL:0000084;2.30e-13;25!CL:0000738;3.65e-13;136!CL:0000945;3.03e-12;24!CL:0000791;6.10e-12;18!CL:0000789;6.10e-12;18!CL:0002419;6.10e-12;18!CL:0000988;8.79e-12;177!CL:0000763;1.18e-11;100!CL:0000236;3.25e-09;13!CL:0000625;7.23e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.19e-69,177;CL:0000037,8.46e-68,168;CL:0002032,7.16e-64,161;CL:0000837,7.16e-64,161;CL:0000738,3.36e-60,136;CL:0002087,6.29e-56,115;CL:0002031,1.07e-52,120;CL:0000763,1.58e-34,108;CL:0000049,1.58e-34,108;CL:0000766,7.96e-32,72;CL:0000839,3.39e-27,66;CL:0000542,2.72e-26,53;CL:0000051,2.72e-26,53;CL:0002194,3.48e-26,59;CL:0000576,3.48e-26,59;CL:0000040,3.48e-26,59;CL:0000559,3.48e-26,59;CL:0000838,6.56e-26,52;CL:0000557,1.88e-25,67;CL:0000473,1.78e-24,48;CL:0000234,1.78e-24,48;CL:0002009,2.68e-24,61;CL:0000860,1.13e-22,42;CL:0002057,1.13e-22,42;CL:0000084,2.50e-13,25;CL:0000827,2.50e-13,25;CL:0000945,3.73e-12,24;CL:0000826,3.73e-12,24;CL:0000791,6.36e-12,18;CL:0000789,6.36e-12,18;CL:0002420,6.36e-12,18;CL:0002419,6.36e-12,18;CL:0000790,6.36e-12,18;CL:0000134,8.28e-10,354;CL:0002320,8.86e-10,361;CL:0000236,1.79e-09,14;CL:0000219,5.38e-08,386;CL:0000625,7.45e-08,11;CL:0002393,1.98e-07,9;CL:0002397,1.98e-07,9;CL:0000034,2.44e-07,441;CL:0000048,4.38e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-16;42!CL:0000051;7.85e-16;53!CL:0000790;6.10e-12;18!CL:0000049;2.12e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!1.40e-09!51;DOID:0060083!1.40e-09!51;DOID:1240!9.26e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.39e-07;51!DOID:0060083;5.39e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.55e-11,51;DOID:0060083,6.55e-11,51;DOID:1240,9.03e-09,39;DOID:8692,9.16e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.91e-27!102;UBERON:0003061!3.91e-27!102;UBERON:0002193!1.35e-26!112;UBERON:0002371!6.34e-17!80;UBERON:0002405!1.39e-15!115;UBERON:0003081!9.85e-15!216;UBERON:0001474!2.87e-13!86;UBERON:0004765!1.11e-09!101;UBERON:0001434!1.11e-09!101;UBERON:0000178!7.58e-09!15;UBERON:0000179!7.58e-09!15;UBERON:0000463!7.58e-09!15;UBERON:0002384!2.76e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.56e-09;15!UBERON:0000179;1.56e-09;15!UBERON:0000463;1.56e-09;15!UBERON:0002390;1.13e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.06e-34,98;UBERON:0003061,2.06e-34,98;UBERON:0002193,5.81e-34,108;UBERON:0002405,1.05e-25,93;UBERON:0002371,1.38e-22,76;UBERON:0001474,1.58e-18,82;UBERON:0003081,1.17e-15,203;UBERON:0004765,2.55e-15,90;UBERON:0001434,1.56e-12,100;UBERON:0000178,1.56e-09,15;UBERON:0000179,1.56e-09,15;UBERON:0000463,1.56e-09,15;UBERON:0002384,6.63e-09,371 | |||
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| ||
|short_description=p2@LIMD2 | |||
}} | }} |
Latest revision as of 17:53, 16 September 2015
Short description: | p2@LIMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIMD2_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | 0bp_to_AK307353, AK310718_5end |
EntrezGene: | LIMD2 |
HGNC: | 28142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.06e-34 | 98 |
blood island | 2.06e-34 | 98 |
hemolymphoid system | 5.81e-34 | 108 |
immune system | 1.05e-25 | 93 |
bone marrow | 1.38e-22 | 76 |
bone element | 1.58e-18 | 82 |
lateral plate mesoderm | 1.17e-15 | 203 |
skeletal element | 2.55e-15 | 90 |
skeletal system | 1.56e-12 | 100 |
blood | 1.56e-09 | 15 |
haemolymphatic fluid | 1.56e-09 | 15 |
organism substance | 1.56e-09 | 15 |
connective tissue | 6.63e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.55e-11 | 51 |
immune system cancer | 6.55e-11 | 51 |
leukemia | 9.03e-09 | 39 |
myeloid leukemia | 9.16e-07 | 31 |