FFCP PHASE1:Hg19::chr14:94844887..94844915,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:94844887..94844915,- to FFCP PHASE1:Hg19::chr14:94844887..94844915,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-1bp_to_M26123_5end | |||
|cluster_id=chr14:94844887..94844915,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_SERPINA1_5end | |||
|id=chr14:94844887..94844915,- | |||
|ontology_enrichment_celltype=CL:0002057!2.18e-53!42;CL:0000860!7.22e-49!45;CL:0002194!1.80e-47!63;CL:0000576!1.80e-47!63;CL:0000040!1.80e-47!63;CL:0000559!1.80e-47!63;CL:0000766!7.77e-47!76;CL:0002009!1.60e-45!65;CL:0000839!3.88e-41!70;CL:0000557!2.46e-40!71;CL:0000763!2.08e-27!112;CL:0000049!2.08e-27!112;CL:0002087!2.40e-23!119;CL:0000738!8.91e-23!140;CL:0002031!1.44e-18!124;CL:0000037!4.44e-16!172;CL:0000566!4.44e-16!172;CL:0002032!5.82e-15!165;CL:0000837!5.82e-15!165;CL:0000988!2.80e-14!182;CL:0002393!2.86e-10!9;CL:0002397!2.86e-10!9;CL:0000181!1.55e-08!12;CL:0000417!1.55e-08!12;CL:0000668!1.55e-08!12;CL:0000414!1.55e-08!12;CL:0000412!1.55e-08!12;CL:0000182!1.55e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-58;33!CL:0002057;1.02e-58;33!CL:0000473;1.01e-42;39!CL:0000234;1.01e-42;39!CL:0000576;3.73e-42;48!CL:0000766;7.76e-27;69!CL:0000182;7.64e-14;12!CL:0000763;1.19e-13;100!CL:0000775;9.24e-12;3!CL:0002087;4.33e-11;104!CL:0002393;1.24e-08;6!CL:0002397;1.24e-08;6!CL:0000738;1.33e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.22e-76,42;CL:0002057,7.22e-76,42;CL:0000473,1.67e-69,48;CL:0000234,1.67e-69,48;CL:0002194,7.58e-54,59;CL:0000576,7.58e-54,59;CL:0000040,7.58e-54,59;CL:0000559,7.58e-54,59;CL:0000766,2.98e-52,72;CL:0002009,7.93e-52,61;CL:0000839,2.63e-47,66;CL:0000557,1.75e-46,67;CL:0000763,6.63e-32,108;CL:0000049,6.63e-32,108;CL:0002087,1.84e-25,115;CL:0000738,3.75e-25,136;CL:0002031,4.75e-24,120;CL:0002032,7.89e-20,161;CL:0000837,7.89e-20,161;CL:0000037,1.26e-18,168;CL:0000988,3.23e-17,177;CL:0000182,8.44e-14,12;CL:0002393,4.61e-12,9;CL:0002397,4.61e-12,9;CL:0000775,9.10e-12,3;CL:0000134,4.20e-09,354;CL:0002320,9.98e-09,361;CL:0000219,2.06e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-56;42!UBERON:0004161;3.59e-11;11!CL:0000049;6.75e-11;108!UBERON:0009497;2.46e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.64e-43!115;UBERON:0002371!8.35e-36!80;UBERON:0002390!1.72e-35!102;UBERON:0003061!1.72e-35!102;UBERON:0002193!2.08e-33!112;UBERON:0001474!3.41e-32!86;UBERON:0004765!2.59e-26!101;UBERON:0001434!2.59e-26!101;UBERON:0003081!3.90e-12!216;UBERON:0002204!1.48e-11!167;UBERON:0009497!4.27e-10!25;UBERON:0000015!4.27e-10!25;UBERON:0002423!4.27e-10!25;UBERON:0006235!4.27e-10!25;UBERON:0004161!4.27e-10!25;UBERON:0000062!1.15e-09!511;UBERON:0005057!1.93e-09!26;UBERON:0002107!3.05e-09!19;UBERON:0006925!3.05e-09!19;UBERON:0008836!3.05e-09!19;UBERON:0000926!5.27e-09!448;UBERON:0004120!5.27e-09!448;UBERON:0006603!5.27e-09!448;UBERON:0008835!5.44e-09!22;UBERON:0003894!5.44e-09!22;UBERON:0009854!1.87e-08!23;UBERON:0007499!1.61e-07!25;UBERON:0003929!2.19e-07!54;UBERON:0009856!4.15e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.81e-14;19!UBERON:0006925;6.81e-14;19!UBERON:0002423;4.04e-10;25!UBERON:0002365;1.27e-07;31!UBERON:0002330;1.27e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-42,76;UBERON:0001474,6.23e-39,82;UBERON:0002405,1.40e-35,93;UBERON:0004765,9.96e-35,90;UBERON:0002390,3.31e-31,98;UBERON:0003061,3.31e-31,98;UBERON:0001434,2.05e-30,100;UBERON:0002193,1.94e-29,108;UBERON:0002204,4.81e-16,167;UBERON:0002107,7.38e-14,19;UBERON:0006925,7.38e-14,19;UBERON:0008836,7.38e-14,19;UBERON:0008835,1.02e-11,22;UBERON:0003894,1.02e-11,22;UBERON:0003081,1.12e-11,203;UBERON:0009854,3.95e-11,23;UBERON:0007499,4.28e-10,25;UBERON:0009497,4.28e-10,25;UBERON:0000015,4.28e-10,25;UBERON:0002423,4.28e-10,25;UBERON:0006235,4.28e-10,25;UBERON:0004161,4.28e-10,25;UBERON:0009856,1.23e-09,26;UBERON:0002384,3.23e-08,371;UBERON:0002365,8.45e-08,31;UBERON:0002330,8.45e-08,31 | |||
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| ||
|short_description=p9@SERPINA1 | |||
}} | }} |
Latest revision as of 17:44, 16 September 2015
Short description: | p9@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -1bp_to_M26123_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.22e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.22e-76 | 42 |
defensive cell | 1.67e-69 | 48 |
phagocyte | 1.67e-69 | 48 |
monopoietic cell | 7.58e-54 | 59 |
monocyte | 7.58e-54 | 59 |
monoblast | 7.58e-54 | 59 |
promonocyte | 7.58e-54 | 59 |
myeloid leukocyte | 2.98e-52 | 72 |
macrophage dendritic cell progenitor | 7.93e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.63e-47 | 66 |
granulocyte monocyte progenitor cell | 1.75e-46 | 67 |
myeloid cell | 6.63e-32 | 108 |
common myeloid progenitor | 6.63e-32 | 108 |
nongranular leukocyte | 1.84e-25 | 115 |
leukocyte | 3.75e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 4.75e-24 | 120 |
hematopoietic oligopotent progenitor cell | 7.89e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.89e-20 | 161 |
hematopoietic stem cell | 1.26e-18 | 168 |
hematopoietic cell | 3.23e-17 | 177 |
hepatocyte | 8.44e-14 | 12 |
intermediate monocyte | 4.61e-12 | 9 |
CD14-positive, CD16-positive monocyte | 4.61e-12 | 9 |
neutrophil | 9.10e-12 | 3 |
mesenchymal cell | 4.20e-09 | 354 |
connective tissue cell | 9.98e-09 | 361 |
motile cell | 2.06e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-42 | 76 |
bone element | 6.23e-39 | 82 |
immune system | 1.40e-35 | 93 |
skeletal element | 9.96e-35 | 90 |
hematopoietic system | 3.31e-31 | 98 |
blood island | 3.31e-31 | 98 |
skeletal system | 2.05e-30 | 100 |
hemolymphoid system | 1.94e-29 | 108 |
musculoskeletal system | 4.81e-16 | 167 |
liver | 7.38e-14 | 19 |
digestive gland | 7.38e-14 | 19 |
liver bud | 7.38e-14 | 19 |
hepatic diverticulum | 1.02e-11 | 22 |
liver primordium | 1.02e-11 | 22 |
lateral plate mesoderm | 1.12e-11 | 203 |
digestive tract diverticulum | 3.95e-11 | 23 |
epithelial sac | 4.28e-10 | 25 |
epithelium of foregut-midgut junction | 4.28e-10 | 25 |
anatomical boundary | 4.28e-10 | 25 |
hepatobiliary system | 4.28e-10 | 25 |
foregut-midgut junction | 4.28e-10 | 25 |
septum transversum | 4.28e-10 | 25 |
sac | 1.23e-09 | 26 |
connective tissue | 3.23e-08 | 371 |
exocrine gland | 8.45e-08 | 31 |
exocrine system | 8.45e-08 | 31 |