FFCP PHASE1:Hg19::chr3:171178157..171178225,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:171178157..171178225,- to FFCP PHASE1:Hg19::chr3:171178157..171178225,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23043 | |EntrezGene=23043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30765 | |HGNC=30765 | ||
|TSSclassifier=strong | |||
|UniProt=F5H865,Q9UKE5,C9JVV1,F5H5M9 | |UniProt=F5H865,Q9UKE5,C9JVV1,F5H5M9 | ||
|association_with_transcript=0bp_to_ENST00000341852,ENST00000369326,ENST00000436636,ENST00000465393,ENST00000538048,NM_001161560,NM_001161561,NM_001161562,NM_001161563,NM_001161564,NM_001161565,NM_001161566,NM_015028,NR_027767,uc003fhh.2,uc003fhi.2,uc003fhj.2,uc003fhk.2,uc003fhl.2,uc003fhm.2,uc003fhn.2,uc003fho.2,uc003fhq.2_5end | |||
|cluster_id=chr3:171178157..171178225,- | |||
|coexpression_cluster_id=C4306 | |||
|description=CAGE_peak_1_at_TNIK_5end | |||
|id=chr3:171178157..171178225,- | |||
|ontology_enrichment_celltype=CL:0000791!4.31e-08!18;CL:0000789!4.31e-08!18;CL:0002420!4.31e-08!18;CL:0002419!4.31e-08!18;CL:0000790!4.31e-08!18;CL:0000084!1.54e-07!25;CL:0000827!1.54e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.67e-08;18!CL:0000789;3.67e-08;18!CL:0002419;3.67e-08;18!CL:0000084;1.51e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.68e-08,18;CL:0000789,3.68e-08,18;CL:0002420,3.68e-08,18;CL:0002419,3.68e-08,18;CL:0000790,3.68e-08,18;CL:0000084,1.33e-07,25;CL:0000827,1.33e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.67e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.82e-27!115;UBERON:0005743!5.10e-27!86;UBERON:0001049!6.86e-27!57;UBERON:0005068!6.86e-27!57;UBERON:0006241!6.86e-27!57;UBERON:0007135!6.86e-27!57;UBERON:0001017!3.22e-26!82;UBERON:0000073!1.00e-25!94;UBERON:0001016!1.00e-25!94;UBERON:0002616!5.12e-24!59;UBERON:0000955!1.18e-22!69;UBERON:0006238!1.18e-22!69;UBERON:0002780!4.46e-21!41;UBERON:0001890!4.46e-21!41;UBERON:0006240!4.46e-21!41;UBERON:0003080!1.36e-20!42;UBERON:0000025!1.52e-19!194;UBERON:0002020!8.87e-19!34;UBERON:0003528!8.87e-19!34;UBERON:0001893!1.35e-18!34;UBERON:0003075!3.63e-18!86;UBERON:0007284!3.63e-18!86;UBERON:0002791!3.73e-18!33;UBERON:0001869!1.49e-17!32;UBERON:0002346!3.15e-15!90;UBERON:0004111!5.86e-15!241;UBERON:0002619!4.50e-14!22;UBERON:0000956!1.99e-13!25;UBERON:0000203!1.99e-13!25;UBERON:0003056!4.30e-13!61;UBERON:0001950!7.43e-13!20;UBERON:0000477!1.96e-09!286;UBERON:0001009!3.27e-09!113;UBERON:0004535!4.02e-09!110;UBERON:0000483!5.01e-08!309;UBERON:0000119!8.25e-08!312;UBERON:0000153!1.73e-07!129;UBERON:0007811!1.73e-07!129;UBERON:0003076!1.81e-07!15;UBERON:0003057!1.81e-07!15;UBERON:0002420!5.01e-07!9;UBERON:0007245!5.01e-07!9;UBERON:0010009!5.01e-07!9;UBERON:0010011!5.01e-07!9;UBERON:0000454!5.01e-07!9;UBERON:0002308!7.02e-07!9;UBERON:0000125!7.02e-07!9;UBERON:0000033!7.33e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.51e-16;32!UBERON:0003528;3.64e-16;34!UBERON:0002020;3.64e-16;34!UBERON:0001869;4.46e-16;32!UBERON:0001893;5.26e-16;34!UBERON:0002780;1.53e-15;41!UBERON:0001890;1.53e-15;41!UBERON:0000073;4.65e-15;53!UBERON:0002616;4.65e-15;53!UBERON:0002619;3.38e-14;22!UBERON:0000956;1.49e-13;25!UBERON:0000203;1.49e-13;25!UBERON:0001950;5.74e-13;20!UBERON:0001017;8.71e-12;75!UBERON:0000955;9.08e-11;68!UBERON:0001016;1.79e-09;83!UBERON:0007023;5.49e-08;114!UBERON:0002420;4.26e-07;9!UBERON:0007245;4.26e-07;9!UBERON:0010009;4.26e-07;9!UBERON:0010011;4.26e-07;9!UBERON:0000454;4.26e-07;9!UBERON:0000125;6.02e-07;9!UBERON:0002308;6.02e-07;9 | |||
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| ||
|short_description=p1@TNIK | |||
}} | }} |
Latest revision as of 17:19, 16 September 2015
Short description: | p1@TNIK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNIK_5end |
Coexpression cluster: | C4306_Mast_hippocampus_amygdala_occipital_caudate_putamen_parietal |
Association with transcript: | 0bp_to_ENST00000341852, ENST00000369326, ENST00000436636, ENST00000465393, ENST00000538048, NM_001161560, NM_001161561, NM_001161562, NM_001161563, NM_001161564, NM_001161565, NM_001161566, NM_015028, NR_027767, uc003fhh.2, uc003fhi.2, uc003fhj.2, uc003fhk.2, uc003fhl.2, uc003fhm.2, uc003fhn.2, uc003fho.2, uc003fhq.2_5end |
EntrezGene: | TNIK |
HGNC: | 30765 |
UniProt: | F5H865Q9UKE5C9JVV1F5H5M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.68e-08 | 18 |
alpha-beta T cell | 3.68e-08 | 18 |
immature T cell | 3.68e-08 | 18 |
mature T cell | 3.68e-08 | 18 |
immature alpha-beta T cell | 3.68e-08 | 18 |
T cell | 1.33e-07 | 25 |
pro-T cell | 1.33e-07 | 25 |