FFCP PHASE1:Hg19::chr14:94640633..94640667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57718 | |EntrezGene=57718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23788 | |HGNC=23788 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUP7 | |UniProt=Q6NUP7 | ||
|association_with_transcript=0bp_to_ENST00000304338,ENST00000555690,NM_020958,NM_058237,uc001ycr.2,uc001ycs.1_5end | |association_with_transcript=0bp_to_ENST00000304338,ENST00000555690,NM_020958,NM_058237,uc001ycr.2,uc001ycs.1_5end | ||
|cluster_id=chr14:94640633..94640667,+ | |||
|coexpression_cluster_id=C3464 | |coexpression_cluster_id=C3464 | ||
|description=CAGE_peak_1_at_PPP4R4_5end | |description=CAGE_peak_1_at_PPP4R4_5end | ||
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|ontology_enrichment_celltype=CL:0002076!1.43e-07!43;CL:0000223!4.94e-07!59 | |ontology_enrichment_celltype=CL:0002076!1.43e-07!43;CL:0000223!4.94e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.08e-07;42 | |ontology_enrichment_celltype_v019=CL:0002076;2.08e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.94e-09,42;CL:0000223,6.40e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.67e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.67e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;3.40e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;3.40e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.18e-22!57;UBERON:0005068!7.18e-22!57;UBERON:0006241!7.18e-22!57;UBERON:0007135!7.18e-22!57;UBERON:0000033!4.65e-19!123;UBERON:0005743!4.84e-19!86;UBERON:0001017!5.27e-19!82;UBERON:0000153!6.37e-19!129;UBERON:0007811!6.37e-19!129;UBERON:0003075!9.21e-19!86;UBERON:0007284!9.21e-19!86;UBERON:0000955!1.97e-18!69;UBERON:0006238!1.97e-18!69;UBERON:0002616!2.75e-18!59;UBERON:0002780!6.65e-17!41;UBERON:0001890!6.65e-17!41;UBERON:0006240!6.65e-17!41;UBERON:0003080!9.21e-17!42;UBERON:0002346!1.06e-16!90;UBERON:0000073!2.66e-16!94;UBERON:0001016!2.66e-16!94;UBERON:0004121!4.33e-16!169;UBERON:0000924!7.53e-15!173;UBERON:0006601!7.53e-15!173;UBERON:0002020!2.02e-13!34;UBERON:0003528!2.02e-13!34;UBERON:0003056!2.49e-13!61;UBERON:0001893!3.21e-13!34;UBERON:0001869!5.98e-13!32;UBERON:0002791!1.20e-12!33;UBERON:0000475!1.48e-11!365;UBERON:0002619!6.48e-11!22;UBERON:0000062!3.47e-10!511;UBERON:0007023!3.59e-10!115;UBERON:0001950!1.04e-09!20;UBERON:0000956!3.15e-09!25;UBERON:0000203!3.15e-09!25 | |ontology_enrichment_uberon=UBERON:0001049!7.18e-22!57;UBERON:0005068!7.18e-22!57;UBERON:0006241!7.18e-22!57;UBERON:0007135!7.18e-22!57;UBERON:0000033!4.65e-19!123;UBERON:0005743!4.84e-19!86;UBERON:0001017!5.27e-19!82;UBERON:0000153!6.37e-19!129;UBERON:0007811!6.37e-19!129;UBERON:0003075!9.21e-19!86;UBERON:0007284!9.21e-19!86;UBERON:0000955!1.97e-18!69;UBERON:0006238!1.97e-18!69;UBERON:0002616!2.75e-18!59;UBERON:0002780!6.65e-17!41;UBERON:0001890!6.65e-17!41;UBERON:0006240!6.65e-17!41;UBERON:0003080!9.21e-17!42;UBERON:0002346!1.06e-16!90;UBERON:0000073!2.66e-16!94;UBERON:0001016!2.66e-16!94;UBERON:0004121!4.33e-16!169;UBERON:0000924!7.53e-15!173;UBERON:0006601!7.53e-15!173;UBERON:0002020!2.02e-13!34;UBERON:0003528!2.02e-13!34;UBERON:0003056!2.49e-13!61;UBERON:0001893!3.21e-13!34;UBERON:0001869!5.98e-13!32;UBERON:0002791!1.20e-12!33;UBERON:0000475!1.48e-11!365;UBERON:0002619!6.48e-11!22;UBERON:0000062!3.47e-10!511;UBERON:0007023!3.59e-10!115;UBERON:0001950!1.04e-09!20;UBERON:0000956!3.15e-09!25;UBERON:0000203!3.15e-09!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.14e-15;41!UBERON:0001890;4.14e-15;41!UBERON:0003528;2.70e-14;34!UBERON:0002020;2.70e-14;34!UBERON:0001893;2.72e-14;34!UBERON:0001869;2.84e-14;32!UBERON:0002791;8.48e-14;32!UBERON:0002619;8.55e-14;22!UBERON:0000073;8.82e-14;53!UBERON:0002616;8.82e-14;53!UBERON:0001950;3.09e-12;20!UBERON:0000956;3.69e-11;25!UBERON:0000203;3.69e-11;25!UBERON:0000955;1.03e-10;68!UBERON:0001017;1.96e-09;75!UBERON:0001016;6.97e-08;83!UBERON:0002420;1.29e-07;9!UBERON:0007245;1.29e-07;9!UBERON:0010009;1.29e-07;9!UBERON:0010011;1.29e-07;9!UBERON:0000454;1.29e-07;9!UBERON:0000125;3.75e-07;9!UBERON:0002308;3.75e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.14e-15;41!UBERON:0001890;4.14e-15;41!UBERON:0003528;2.70e-14;34!UBERON:0002020;2.70e-14;34!UBERON:0001893;2.72e-14;34!UBERON:0001869;2.84e-14;32!UBERON:0002791;8.48e-14;32!UBERON:0002619;8.55e-14;22!UBERON:0000073;8.82e-14;53!UBERON:0002616;8.82e-14;53!UBERON:0001950;3.09e-12;20!UBERON:0000956;3.69e-11;25!UBERON:0000203;3.69e-11;25!UBERON:0000955;1.03e-10;68!UBERON:0001017;1.96e-09;75!UBERON:0001016;6.97e-08;83!UBERON:0002420;1.29e-07;9!UBERON:0007245;1.29e-07;9!UBERON:0010009;1.29e-07;9!UBERON:0010011;1.29e-07;9!UBERON:0000454;1.29e-07;9!UBERON:0000125;3.75e-07;9!UBERON:0002308;3.75e-07;9 | ||
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| ||
|short_description=p1@PPP4R4 | |short_description=p1@PPP4R4 | ||
}} | }} |
Latest revision as of 17:16, 16 September 2015
Short description: | p1@PPP4R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP4R4_5end |
Coexpression cluster: | C3464_Small_granulosa_Fibroblast_squamous_amygdala_thalamus_epidermoid |
Association with transcript: | 0bp_to_ENST00000304338, ENST00000555690, NM_020958, NM_058237, uc001ycr.2, uc001ycs.1_5end |
EntrezGene: | PPP4R4 |
HGNC: | 23788 |
UniProt: | Q6NUP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.94e-09 | 42 |
endodermal cell | 6.40e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.66e-08 | 14 |